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Q90VZ3 (LYG_PAROL) Reviewed, UniProtKB/Swiss-Prot

Last modified June 13, 2012. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length195 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Possesses lytic activity against M.lysodeikticus and several fish pathogenic bacteria.

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.

Tissue specificity

Ubiquitous. Ref.1

Sequence similarities

Belongs to the glycosyl hydrolase 23 family.

Biophysicochemical properties

pH dependence:

Optimum pH is 6.0.

Temperature dependence:

Optimum temperature is 25 degrees Celsius.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 195195Lysozyme g
PRO_0000193520

Sites

Active site711 By similarity
Active site841 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q90VZ3 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 511DAF31876F662F

FASTA19521,385
        10         20         30         40         50         60 
MSYGQIRLVE TSGASGATSQ QDNLGYSGVK ASHKMAEIDS GRMSKYKSKI NKVGQSYGIE 

        70         80         90        100        110        120 
PALIAAIISR ESRAGNQLKD GWGDWNPQRQ AYNAWGLMQV DVNPNGGGHT AVGGWDSEDH 

       130        140        150        160        170        180 
LRQATGILVT FIERIRTKFP GWSKEKQLKG GIAAYNMGDK NVHSYEGVDE NTTGRDYSND 

       190 
VTARAQWYRD NGYSG

« Hide

References

[1]"Molecular cloning, expression and evolution of the Japanese flounder goose-type lysozyme gene, and the lytic activity of its recombinant protein."
Hikima J., Minagawa S., Hirono I., Aoki T.
Biochim. Biophys. Acta 1520:35-44(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], CHARACTERIZATION, TISSUE SPECIFICITY.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB050591 Genomic DNA. Translation: BAB62407.1.
AB050590 mRNA. Translation: BAB62406.1.

3D structure databases

ProteinModelPortalQ90VZ3.
ModBaseSearch...

Protein family/group databases

CAZyGH23. Glycoside Hydrolase Family 23.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG006299.

Family and domain databases

InterProIPR002152. Glyco_hydro_23.
IPR023346. Lysozyme-like_dom.
IPR008258. Lytic_TGlycosylase-like_cat.
[Graphical view]
PfamPF01464. SLT. 1 hit.
[Graphical view]
PIRSFPIRSF001065. Lysozyme_g. 1 hit.
PRINTSPR00749. LYSOZYMEG.
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameLYG_PAROL
AccessionPrimary (citable) accession number: Q90VZ3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: December 1, 2001
Last modified: June 13, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

SIMILARITY comments

Index of protein domains and families

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