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Q90662

- Q90662_CHICK

UniProt

Q90662 - Q90662_CHICK

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Protein
Submitted name:

Synemin

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SyneminImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

  1. intermediate filament Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiQ90662.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000033263.

Structurei

3D structure databases

ProteinModelPortaliQ90662.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotation

Keywords - Domaini

Coiled coilSAAS annotation

Phylogenomic databases

eggNOGiNOG139727.
HOGENOMiHOG000154476.
HOVERGENiHBG008974.
KOiK10376.
PhylomeDBiQ90662.

Family and domain databases

InterProiIPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view]
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiPF00038. Filament. 1 hit.
[Graphical view]
PROSITEiPS00226. IF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q90662-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MWRRWEAGWD EKRELQELNS RLRFSVSRVR ELEEENRFLA RELAELREQE
60 70 80 90 100
LIGLRVPEQE LAWLRMQLEE LSQAKLEAEL ERDGLRRELE QLQLLGAEVL
110 120 130 140 150
ATRRRLEPEL AGQRQLLQRL QGECVALEEL LLQLQDEHGH LAERQRREVV
160 170 180 190 200
EIRELRMDLA ALPPPLSALS LEELEETYEM LLSQSCQETL LRYQEQIQRL
210 220 230 240 250
QEQEAQRSRE NLELLREESR QCRQHLEDLH RQGQELCGLR ERLEQELLAM
260 270 280 290 300
QDRHGAEVEE YQRIIDALEE EKQFLTMSIT DYLRDYQELL QVKAGLILEI
310 320 330 340 350
ETYRALLEGK SNQWVITWRD QLIGKLPQDI INTSYNYTDM YSTYQERNQN
360 370 380 390 400
KTSPAIRITD TRHRIPATNT SSSARYSAQS TQAGSQTAVS GTAFGKGVLG
410 420 430 440 450
SIYRPSTTIR KDERIVTDHK ELRTYTPGYS SWKHTETQQK TIPERKKTEV
460 470 480 490 500
TSSSTVSFSK QSTHAERSDK DNKADTKPKI SESLRTKSNF SKFPTYELNT
510 520 530 540 550
SSKPSVYEET ITETRTTIKE KRGGSKPTEE GTSLPKEKDK LEKQTKEEKR
560 570 580 590 600
KVDEKTFVEE RSVNFGRQTD AKMGIEQKKY VREEVISQKV AESDISNART
610 620 630 640 650
LKKESSKKDT DVSFESKSKE VIEIPITLER PAPDKVSQKK NEDISSQDFK
660 670 680 690 700
TSRGRETGDH VTKPAEIHKI RVSESDLRDE EKTSDRSHKM KTLATESIAE
710 720 730 740 750
NIAADILKSF TPSSSSEVST DTKVTSSSKQ EQPDDGKIRT EITVQSRVQE
760 770 780 790 800
NIDVSAEADR GSLSNQDVRK VLESAEGTPS KQEIENIVRH GLKGSGVAKN
810 820 830 840 850
MSVNVEIVEE TVDYTTDERT DFSTPFEVEE VEDTFPEREK RYGDDEQDIT
860 870 880 890 900
LTYEDLKKKK QRHESFTHVE EVTEEDDSPI EQKYFVSVPD DHPIINEKDD
910 920 930 940 950
DSVYGQIHIE EESTIKYSWQ DDFVQGTQSK RDEGVSSPEE TYRVVGEEAA
960 970 980 990 1000
AHILKEEHPK AGTSHVESVV IEKEIKIPQE FQASIKGLLS KETKDPKQQL
1010 1020 1030 1040 1050
KEALEQLGGS LPESVKEELS ALTKESQADS SNLEFDIKKV HQTEEGGLLT
1060 1070 1080 1090 1100
IVAEVNLSQT INADEFDIAQ LGEIIAGEKE KTTSHSLKRD KLERVAGGKI
1110 1120 1130 1140 1150
STETDVSARS DIYTPVANQE VYKSSTVRKT GSTGYHTTEK VIYDSSILET
1160 1170 1180 1190 1200
ANLGEDSHSP ESTDESKSVR HIRVGPTEVQ RFEQIVYEGP GSEMLGLSAT
1210 1220 1230 1240 1250
EDVVQTEGTS EMSHSVKHFK LGPKEIQTTE EVIYRGPITT TVEEIDSGNL
1260 1270 1280 1290 1300
SQQTFSSDIN RSTRHVTVGS RQVIEEVSFE GLGSDSLELN SSGHLSQSEG
1310 1320 1330 1340 1350
SVDVSRSVRQ FRLHPKEIHS EQVIFEGPIS GKVEVSDSRD FSQTESSVRH
1360 1370 1380 1390 1400
IQLGPKEFMT AEKVIYQGPI TEHIEISEVG DQTHSESSVK HFRLGQTGVR
1410 1420 1430 1440 1450
TTERIIYQGS LSETPELINK GHLSENEGSS DISTSFRHVR ITPVETQTEQ
1460 1470 1480 1490 1500
IIFTRPISET LEDHSQARES SESSSSMKHV KVGSSGTSFT FQMDVSNVGG
1510 1520 1530 1540 1550
VSMAESEEQA TVVISNKQDP SVNQSQFRVE SDHSGDSENK RSYIHSSFSQ
1560 1570 1580 1590 1600
DHVENVVEKS DFDKTVQLQR MVDQRSVISD DKKVALLYLD HEEEDDEEND

GQWF
Length:1,604
Mass (Da):182,188
Last modified:May 1, 2000 - v2
Checksum:iC30A09488C519041
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28143 mRNA. Translation: AAA80653.2.
PIRiI50721.
RefSeqiNP_990140.2. NM_204809.2.
UniGeneiGga.4306.

Genome annotation databases

GeneIDi395599.
KEGGigga:395599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28143 mRNA. Translation: AAA80653.2 .
PIRi I50721.
RefSeqi NP_990140.2. NM_204809.2.
UniGenei Gga.4306.

3D structure databases

ProteinModelPortali Q90662.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 9031.ENSGALP00000033263.

Proteomic databases

PaxDbi Q90662.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 395599.
KEGGi gga:395599.

Organism-specific databases

CTDi 23336.

Phylogenomic databases

eggNOGi NOG139727.
HOGENOMi HOG000154476.
HOVERGENi HBG008974.
KOi K10376.
PhylomeDBi Q90662.

Miscellaneous databases

NextBioi 20815672.
PROi Q90662.

Family and domain databases

InterProi IPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view ]
PANTHERi PTHR23239. PTHR23239. 1 hit.
Pfami PF00038. Filament. 1 hit.
[Graphical view ]
PROSITEi PS00226. IF. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Gizzard muscleImported.
  2. "Molecular characteristics and interactions of the intermediate filament protein synemin. Interactions with alpha-actinin may anchor synemin-containing heterofilaments."
    Bellin R.M., Sernett S.W., Becker B., Ip W., Huiatt T.W., Robson R.M.
    J. Biol. Chem. 274:29493-29499(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Gizzard muscleImported.

Entry informationi

Entry nameiQ90662_CHICK
AccessioniPrimary (citable) accession number: Q90662
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 1, 2000
Last modified: November 26, 2014
This is version 77 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)