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Q90662

- Q90662_CHICK

UniProt

Q90662 - Q90662_CHICK

Protein
Submitted name:

Synemin

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 2 (01 May 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    SyneminImported
    OrganismiGallus gallus (Chicken)Imported
    Taxonomic identifieri9031 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

    Subcellular locationi

    GO - Cellular componenti

    1. intermediate filament Source: UniProtKB-KW

    Keywords - Cellular componenti

    Intermediate filamentUniRule annotationSAAS annotation

    PTM / Processingi

    Proteomic databases

    PaxDbiQ90662.

    Interactioni

    Protein-protein interaction databases

    STRINGi9031.ENSGALP00000033263.

    Structurei

    3D structure databases

    ProteinModelPortaliQ90662.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the intermediate filament family.UniRule annotation

    Keywords - Domaini

    Coiled coilSAAS annotation

    Phylogenomic databases

    eggNOGiNOG139727.
    HOGENOMiHOG000154476.
    HOVERGENiHBG008974.
    KOiK10376.
    PhylomeDBiQ90662.

    Family and domain databases

    InterProiIPR001664. IF.
    IPR018039. Intermediate_filament_CS.
    [Graphical view]
    PANTHERiPTHR23239. PTHR23239. 1 hit.
    PfamiPF00038. Filament. 1 hit.
    [Graphical view]
    PROSITEiPS00226. IF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q90662-1 [UniParc]FASTAAdd to Basket

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    MWRRWEAGWD EKRELQELNS RLRFSVSRVR ELEEENRFLA RELAELREQE     50
    LIGLRVPEQE LAWLRMQLEE LSQAKLEAEL ERDGLRRELE QLQLLGAEVL 100
    ATRRRLEPEL AGQRQLLQRL QGECVALEEL LLQLQDEHGH LAERQRREVV 150
    EIRELRMDLA ALPPPLSALS LEELEETYEM LLSQSCQETL LRYQEQIQRL 200
    QEQEAQRSRE NLELLREESR QCRQHLEDLH RQGQELCGLR ERLEQELLAM 250
    QDRHGAEVEE YQRIIDALEE EKQFLTMSIT DYLRDYQELL QVKAGLILEI 300
    ETYRALLEGK SNQWVITWRD QLIGKLPQDI INTSYNYTDM YSTYQERNQN 350
    KTSPAIRITD TRHRIPATNT SSSARYSAQS TQAGSQTAVS GTAFGKGVLG 400
    SIYRPSTTIR KDERIVTDHK ELRTYTPGYS SWKHTETQQK TIPERKKTEV 450
    TSSSTVSFSK QSTHAERSDK DNKADTKPKI SESLRTKSNF SKFPTYELNT 500
    SSKPSVYEET ITETRTTIKE KRGGSKPTEE GTSLPKEKDK LEKQTKEEKR 550
    KVDEKTFVEE RSVNFGRQTD AKMGIEQKKY VREEVISQKV AESDISNART 600
    LKKESSKKDT DVSFESKSKE VIEIPITLER PAPDKVSQKK NEDISSQDFK 650
    TSRGRETGDH VTKPAEIHKI RVSESDLRDE EKTSDRSHKM KTLATESIAE 700
    NIAADILKSF TPSSSSEVST DTKVTSSSKQ EQPDDGKIRT EITVQSRVQE 750
    NIDVSAEADR GSLSNQDVRK VLESAEGTPS KQEIENIVRH GLKGSGVAKN 800
    MSVNVEIVEE TVDYTTDERT DFSTPFEVEE VEDTFPEREK RYGDDEQDIT 850
    LTYEDLKKKK QRHESFTHVE EVTEEDDSPI EQKYFVSVPD DHPIINEKDD 900
    DSVYGQIHIE EESTIKYSWQ DDFVQGTQSK RDEGVSSPEE TYRVVGEEAA 950
    AHILKEEHPK AGTSHVESVV IEKEIKIPQE FQASIKGLLS KETKDPKQQL 1000
    KEALEQLGGS LPESVKEELS ALTKESQADS SNLEFDIKKV HQTEEGGLLT 1050
    IVAEVNLSQT INADEFDIAQ LGEIIAGEKE KTTSHSLKRD KLERVAGGKI 1100
    STETDVSARS DIYTPVANQE VYKSSTVRKT GSTGYHTTEK VIYDSSILET 1150
    ANLGEDSHSP ESTDESKSVR HIRVGPTEVQ RFEQIVYEGP GSEMLGLSAT 1200
    EDVVQTEGTS EMSHSVKHFK LGPKEIQTTE EVIYRGPITT TVEEIDSGNL 1250
    SQQTFSSDIN RSTRHVTVGS RQVIEEVSFE GLGSDSLELN SSGHLSQSEG 1300
    SVDVSRSVRQ FRLHPKEIHS EQVIFEGPIS GKVEVSDSRD FSQTESSVRH 1350
    IQLGPKEFMT AEKVIYQGPI TEHIEISEVG DQTHSESSVK HFRLGQTGVR 1400
    TTERIIYQGS LSETPELINK GHLSENEGSS DISTSFRHVR ITPVETQTEQ 1450
    IIFTRPISET LEDHSQARES SESSSSMKHV KVGSSGTSFT FQMDVSNVGG 1500
    VSMAESEEQA TVVISNKQDP SVNQSQFRVE SDHSGDSENK RSYIHSSFSQ 1550
    DHVENVVEKS DFDKTVQLQR MVDQRSVISD DKKVALLYLD HEEEDDEEND 1600
    GQWF 1604
    Length:1,604
    Mass (Da):182,188
    Last modified:May 1, 2000 - v2
    Checksum:iC30A09488C519041
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U28143 mRNA. Translation: AAA80653.2.
    PIRiI50721.
    RefSeqiNP_990140.2. NM_204809.2.
    UniGeneiGga.4306.

    Genome annotation databases

    GeneIDi395599.
    KEGGigga:395599.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U28143 mRNA. Translation: AAA80653.2 .
    PIRi I50721.
    RefSeqi NP_990140.2. NM_204809.2.
    UniGenei Gga.4306.

    3D structure databases

    ProteinModelPortali Q90662.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9031.ENSGALP00000033263.

    Proteomic databases

    PaxDbi Q90662.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 395599.
    KEGGi gga:395599.

    Organism-specific databases

    CTDi 23336.

    Phylogenomic databases

    eggNOGi NOG139727.
    HOGENOMi HOG000154476.
    HOVERGENi HBG008974.
    KOi K10376.
    PhylomeDBi Q90662.

    Miscellaneous databases

    NextBioi 20815672.
    PROi Q90662.

    Family and domain databases

    InterProi IPR001664. IF.
    IPR018039. Intermediate_filament_CS.
    [Graphical view ]
    PANTHERi PTHR23239. PTHR23239. 1 hit.
    Pfami PF00038. Filament. 1 hit.
    [Graphical view ]
    PROSITEi PS00226. IF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Gizzard muscleImported.
    2. "Molecular characteristics and interactions of the intermediate filament protein synemin. Interactions with alpha-actinin may anchor synemin-containing heterofilaments."
      Bellin R.M., Sernett S.W., Becker B., Ip W., Huiatt T.W., Robson R.M.
      J. Biol. Chem. 274:29493-29499(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Gizzard muscleImported.

    Entry informationi

    Entry nameiQ90662_CHICK
    AccessioniPrimary (citable) accession number: Q90662
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 76 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)