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Q90662

- Q90662_CHICK

UniProt

Q90662 - Q90662_CHICK

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Protein
Submitted name: Synemin
Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SyneminImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

GO - Cellular componenti

  1. intermediate filament Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotations

PTM / Processingi

Proteomic databases

PaxDbiQ90662.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000033263.

Structurei

3D structure databases

ProteinModelPortaliQ90662.

Family & Domainsi

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotation

Keywords - Domaini

Coiled coilSAAS annotations

Phylogenomic databases

eggNOGiNOG139727.
HOGENOMiHOG000154476.
HOVERGENiHBG008974.
KOiK10376.
PhylomeDBiQ90662.

Family and domain databases

InterProiIPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view]
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiPF00038. Filament. 1 hit.
[Graphical view]
PROSITEiPS00226. IF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q90662-1 [UniParc]FASTAAdd to Basket

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MWRRWEAGWD EKRELQELNS RLRFSVSRVR ELEEENRFLA RELAELREQE     50
LIGLRVPEQE LAWLRMQLEE LSQAKLEAEL ERDGLRRELE QLQLLGAEVL 100
ATRRRLEPEL AGQRQLLQRL QGECVALEEL LLQLQDEHGH LAERQRREVV 150
EIRELRMDLA ALPPPLSALS LEELEETYEM LLSQSCQETL LRYQEQIQRL 200
QEQEAQRSRE NLELLREESR QCRQHLEDLH RQGQELCGLR ERLEQELLAM 250
QDRHGAEVEE YQRIIDALEE EKQFLTMSIT DYLRDYQELL QVKAGLILEI 300
ETYRALLEGK SNQWVITWRD QLIGKLPQDI INTSYNYTDM YSTYQERNQN 350
KTSPAIRITD TRHRIPATNT SSSARYSAQS TQAGSQTAVS GTAFGKGVLG 400
SIYRPSTTIR KDERIVTDHK ELRTYTPGYS SWKHTETQQK TIPERKKTEV 450
TSSSTVSFSK QSTHAERSDK DNKADTKPKI SESLRTKSNF SKFPTYELNT 500
SSKPSVYEET ITETRTTIKE KRGGSKPTEE GTSLPKEKDK LEKQTKEEKR 550
KVDEKTFVEE RSVNFGRQTD AKMGIEQKKY VREEVISQKV AESDISNART 600
LKKESSKKDT DVSFESKSKE VIEIPITLER PAPDKVSQKK NEDISSQDFK 650
TSRGRETGDH VTKPAEIHKI RVSESDLRDE EKTSDRSHKM KTLATESIAE 700
NIAADILKSF TPSSSSEVST DTKVTSSSKQ EQPDDGKIRT EITVQSRVQE 750
NIDVSAEADR GSLSNQDVRK VLESAEGTPS KQEIENIVRH GLKGSGVAKN 800
MSVNVEIVEE TVDYTTDERT DFSTPFEVEE VEDTFPEREK RYGDDEQDIT 850
LTYEDLKKKK QRHESFTHVE EVTEEDDSPI EQKYFVSVPD DHPIINEKDD 900
DSVYGQIHIE EESTIKYSWQ DDFVQGTQSK RDEGVSSPEE TYRVVGEEAA 950
AHILKEEHPK AGTSHVESVV IEKEIKIPQE FQASIKGLLS KETKDPKQQL 1000
KEALEQLGGS LPESVKEELS ALTKESQADS SNLEFDIKKV HQTEEGGLLT 1050
IVAEVNLSQT INADEFDIAQ LGEIIAGEKE KTTSHSLKRD KLERVAGGKI 1100
STETDVSARS DIYTPVANQE VYKSSTVRKT GSTGYHTTEK VIYDSSILET 1150
ANLGEDSHSP ESTDESKSVR HIRVGPTEVQ RFEQIVYEGP GSEMLGLSAT 1200
EDVVQTEGTS EMSHSVKHFK LGPKEIQTTE EVIYRGPITT TVEEIDSGNL 1250
SQQTFSSDIN RSTRHVTVGS RQVIEEVSFE GLGSDSLELN SSGHLSQSEG 1300
SVDVSRSVRQ FRLHPKEIHS EQVIFEGPIS GKVEVSDSRD FSQTESSVRH 1350
IQLGPKEFMT AEKVIYQGPI TEHIEISEVG DQTHSESSVK HFRLGQTGVR 1400
TTERIIYQGS LSETPELINK GHLSENEGSS DISTSFRHVR ITPVETQTEQ 1450
IIFTRPISET LEDHSQARES SESSSSMKHV KVGSSGTSFT FQMDVSNVGG 1500
VSMAESEEQA TVVISNKQDP SVNQSQFRVE SDHSGDSENK RSYIHSSFSQ 1550
DHVENVVEKS DFDKTVQLQR MVDQRSVISD DKKVALLYLD HEEEDDEEND 1600
GQWF 1604
Length:1,604
Mass (Da):182,188
Last modified:May 1, 2000 - v2
Checksum:iC30A09488C519041
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U28143 mRNA. Translation: AAA80653.2.
PIRiI50721.
RefSeqiNP_990140.2. NM_204809.2.
UniGeneiGga.4306.

Genome annotation databases

GeneIDi395599.
KEGGigga:395599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U28143 mRNA. Translation: AAA80653.2 .
PIRi I50721.
RefSeqi NP_990140.2. NM_204809.2.
UniGenei Gga.4306.

3D structure databases

ProteinModelPortali Q90662.
ModBasei Search...

Protein-protein interaction databases

STRINGi 9031.ENSGALP00000033263.

Proteomic databases

PaxDbi Q90662.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 395599.
KEGGi gga:395599.

Organism-specific databases

CTDi 23336.

Phylogenomic databases

eggNOGi NOG139727.
HOGENOMi HOG000154476.
HOVERGENi HBG008974.
KOi K10376.
PhylomeDBi Q90662.

Miscellaneous databases

NextBioi 20815672.
PROi Q90662.

Family and domain databases

InterProi IPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view ]
PANTHERi PTHR23239. PTHR23239. 1 hit.
Pfami PF00038. Filament. 1 hit.
[Graphical view ]
PROSITEi PS00226. IF. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Gizzard muscleImported.
  2. "Molecular characteristics and interactions of the intermediate filament protein synemin. Interactions with alpha-actinin may anchor synemin-containing heterofilaments."
    Bellin R.M., Sernett S.W., Becker B., Ip W., Huiatt T.W., Robson R.M.
    J. Biol. Chem. 274:29493-29499(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Gizzard muscleImported.

Entry informationi

Entry nameiQ90662_CHICK
AccessioniPrimary (citable) accession number: Q90662
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 1, 2000
Last modified: July 9, 2014
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi