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Q90629

- TRY3_CHICK

UniProt

Q90629 - TRY3_CHICK

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Protein

Trypsin II-P29

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Preferential cleavage: Arg-|-Xaa, Lys-|-Xaa.

Cofactori

Ca2+By similarityNote: Binds 1 Ca(2+) ion per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei65 – 651Charge relay systemBy similarity
Metal bindingi77 – 771CalciumBy similarity
Metal bindingi79 – 791Calcium; via carbonyl oxygenBy similarity
Metal bindingi82 – 821Calcium; via carbonyl oxygenBy similarity
Metal bindingi87 – 871CalciumBy similarity
Active sitei109 – 1091Charge relay systemBy similarity
Sitei196 – 1961Required for specificityBy similarity
Active sitei202 – 2021Charge relay systemBy similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. serine-type endopeptidase activity Source: InterPro

GO - Biological processi

  1. digestion Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Serine protease

Keywords - Biological processi

Digestion

Keywords - Ligandi

Calcium, Metal-binding

Enzyme and pathway databases

ReactomeiREACT_197190. Degradation of the extracellular matrix.
REACT_197231. Activation of Matrix Metalloproteinases.
REACT_247929. Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs).

Names & Taxonomyi

Protein namesi
Recommended name:
Trypsin II-P29 (EC:3.4.21.4)
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
ProteomesiUP000000539: Unplaced

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1616By similarityAdd
BLAST
Propeptidei17 – 259Activation peptideBy similarityPRO_0000028223
Chaini26 – 248223Trypsin II-P29PRO_0000028224Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi32 ↔ 162PROSITE-ProRule annotation
Disulfide bondi50 ↔ 66PROSITE-ProRule annotation
Disulfide bondi134 ↔ 235PROSITE-ProRule annotation
Disulfide bondi141 ↔ 208PROSITE-ProRule annotation
Disulfide bondi173 ↔ 187PROSITE-ProRule annotation
Disulfide bondi198 ↔ 222PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond, Zymogen

Proteomic databases

PaxDbiQ90629.

Expressioni

Tissue specificityi

High levels are seen in the pancreas while lower levels are found in the liver, spleen and thymus.

Structurei

3D structure databases

ProteinModelPortaliQ90629.
SMRiQ90629. Positions 26-247.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 246221Peptidase S1PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase S1 family.PROSITE-ProRule annotation
Contains 1 peptidase S1 domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG5640.
HOGENOMiHOG000251820.
HOVERGENiHBG013304.
KOiK01312.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q90629-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKFLFLILSC LGAAVAFPGG ADDDKIVGGY TCPEHSVPYQ VSLNSGYHFC
60 70 80 90 100
GGSLINSQWV LSAAHCYKSR IQVRLGEYNI DVQEDSEVVR SSSVIIRHPK
110 120 130 140 150
YSSITLNNDI MLIKLASAVE YSADIQPIAL PSSCAKAGTE CLISGWGNTL
160 170 180 190 200
SNGYNYPELL QCLNAPILSD QECQEAYPGD ITSNMICVGF LEGGKDSCQG
210 220 230 240
DSGGPVVCNG ELQGIVSWGI GCALKGYPGV YTKVCNYVDW IQETIAAY
Length:248
Mass (Da):26,622
Last modified:November 1, 1996 - v1
Checksum:iE5E16B07622B588E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U15157 mRNA. Translation: AAA79914.1.
PIRiS55066.
RefSeqiNP_990715.1. NM_205384.1.
UniGeneiGga.10164.

Genome annotation databases

GeneIDi396344.
KEGGigga:396344.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U15157 mRNA. Translation: AAA79914.1 .
PIRi S55066.
RefSeqi NP_990715.1. NM_205384.1.
UniGenei Gga.10164.

3D structure databases

ProteinModelPortali Q90629.
SMRi Q90629. Positions 26-247.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q90629.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 396344.
KEGGi gga:396344.

Organism-specific databases

CTDi 5645.

Phylogenomic databases

eggNOGi COG5640.
HOGENOMi HOG000251820.
HOVERGENi HBG013304.
KOi K01312.

Enzyme and pathway databases

Reactomei REACT_197190. Degradation of the extracellular matrix.
REACT_197231. Activation of Matrix Metalloproteinases.
REACT_247929. Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs).

Miscellaneous databases

NextBioi 20816392.
PROi Q90629.

Family and domain databases

InterProi IPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view ]
Pfami PF00089. Trypsin. 1 hit.
[Graphical view ]
PRINTSi PR00722. CHYMOTRYPSIN.
SMARTi SM00020. Tryp_SPc. 1 hit.
[Graphical view ]
SUPFAMi SSF50494. SSF50494. 1 hit.
PROSITEi PS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Isolation and characterization of the chicken trypsinogen gene family."
    Wang K., Gan L., Lee I., Hood L.E.
    Biochem. J. 307:471-479(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Pancreas.

Entry informationi

Entry nameiTRY3_CHICK
AccessioniPrimary (citable) accession number: Q90629
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: November 26, 2014
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3