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Protein
Submitted name:

Growth-associated protein

Gene

gap43

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • regulation of growth Source: InterPro
  • tissue regeneration Source: ZFIN
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Growth-associated proteinImported
Gene namesi
Name:gap43Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-990415-87. gap43.

PTM / Processingi

Proteomic databases

PaxDbiQ90462.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000002791.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 3231Neuromodulin_NInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IVZP. Eukaryota.
ENOG411256P. LUCA.
HOVERGENiHBG006468.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
IPR001422. Neuromodulin.
IPR018947. Neuromodulin_gap-junction_N.
IPR033137. Neuromodulin_P_site.
IPR018243. Neuromodulin_palmitoyl_site.
[Graphical view]
PfamiPF00612. IQ. 1 hit.
PF10580. Neuromodulin_N. 1 hit.
[Graphical view]
PRINTSiPR00215. NEUROMODULIN.
SMARTiSM00015. IQ. 1 hit.
[Graphical view]
PROSITEiPS50096. IQ. 1 hit.
PS00412. NEUROMODULIN_1. 1 hit.
PS00413. NEUROMODULIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q90462-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLCCIRRTKP VEKNEEADQE IKQDGIKPEE NAHKAATKIQ ASFRGHITRK
60 70 80 90 100
KMKDGEKEEE NGEVPEEQEE EKPADASTET QEDPKPEQPN SPANEAPPTA
110 120 130 140 150
AADPAPSDTP AKEEVKEPQQ EVEKPKEEEQ SSAAADEKPE EEGNAQKEEK
160 170 180 190
EEEKPADVPE AESQETHQID KPDAAEESKP AEGAVSDAGT EESV
Length:194
Mass (Da):21,289
Last modified:November 1, 1996 - v1
Checksum:i4EC1CB4215BD07FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L27645 mRNA. Translation: AAA50027.1.
RefSeqiNP_571416.1. NM_131341.1.
UniGeneiDr.92.

Genome annotation databases

GeneIDi30608.
KEGGidre:30608.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L27645 mRNA. Translation: AAA50027.1.
RefSeqiNP_571416.1. NM_131341.1.
UniGeneiDr.92.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000002791.

Proteomic databases

PaxDbiQ90462.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi30608.
KEGGidre:30608.

Organism-specific databases

CTDi2596.
ZFINiZDB-GENE-990415-87. gap43.

Phylogenomic databases

eggNOGiENOG410IVZP. Eukaryota.
ENOG411256P. LUCA.
HOVERGENiHBG006468.

Miscellaneous databases

NextBioi20806973.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
IPR001422. Neuromodulin.
IPR018947. Neuromodulin_gap-junction_N.
IPR033137. Neuromodulin_P_site.
IPR018243. Neuromodulin_palmitoyl_site.
[Graphical view]
PfamiPF00612. IQ. 1 hit.
PF10580. Neuromodulin_N. 1 hit.
[Graphical view]
PRINTSiPR00215. NEUROMODULIN.
SMARTiSM00015. IQ. 1 hit.
[Graphical view]
PROSITEiPS50096. IQ. 1 hit.
PS00412. NEUROMODULIN_1. 1 hit.
PS00413. NEUROMODULIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Zebrafish GAP-43 cDNA."
    Lin Y.P., Fishman M.C.
    Submitted (JAN-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ90462_DANRE
AccessioniPrimary (citable) accession number: Q90462
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.