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Q90320 (Q90320_CYPCA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length324 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682 SAAS SAAS020479.

Sequence similarities

Contains homeobox DNA-binding domain. SAAS SAAS020479

Sequences

Sequence LengthMass (Da)Tools
Q90320 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 0E092B545E1D9538

FASTA32436,387
        10         20         30         40         50         60 
MYVGYLLDKE GSMYHQGSVR RSGISLPPQN FVSTPQYSDF TGYHHVPNMD THAQSAGAWG 

        70         80         90        100        110        120 
PPYGAPREDW GAYSLGPPNT ISAPMSSSSP GQVSYCSSDY NAMHGPGSAV LPPPPENISV 

       130        140        150        160        170        180 
GQLSPERERR NSYQWMSKTV QSSSTGKTRT KEKYRVVYTD HQRLELEKEF HFNRYITIRR 

       190        200        210        220        230        240 
KSELAVNLGL SERQVKIWFQ NRRAKERKLI KKKLGVSDGS GGSVHSDPGS VSPLPVPGVT 

       250        260        270        280        290        300 
ESVRHTRFSV PTPRNERLTI YEEHTASYCH SVNSNLKDPT LTEHSNTLKG QNRSGPLAWT 

       310        320 
KRITNYYTTG IKARVVDYHR RITS 

« Hide

References

[1]"Expression of carp-cdx1, a caudal homolog, in embryos of the carp, Cyprinus carpio."
Stroband H.W.J., Stevens C., te Kronnie G., Samallo J., Schipper H., Kramer B., Timmermans L.P.M.
Roux's Arch. Dev. Biol. 204:369-377(1995)
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Whole embryo EMBL CAA56695.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X80668 mRNA. Translation: CAA56695.1.
PIRI50125.

3D structure databases

ProteinModelPortalQ90320.
SMRQ90320. Positions 151-213.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG005302.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
InterProIPR006820. Caudal_activation_dom.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
[Graphical view]
PfamPF04731. Caudal_act. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSPR00024. HOMEOBOX.
PR00031. HTHREPRESSR.
SMARTSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMSSF46689. SSF46689. 1 hit.
PROSITEPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ90320_CYPCA
AccessionPrimary (citable) accession number: Q90320
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 16, 2013
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)