Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q90320

- Q90320_CYPCA

UniProt

Q90320 - Q90320_CYPCA

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Cdx1 protein

Gene

cdx1

Organism
Cyprinus carpio (Common carp)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro

GO - Biological processi

  1. multicellular organismal development Source: InterPro
  2. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cdx1 proteinImported
Gene namesi
Name:cdx1Imported
OrganismiCyprinus carpio (Common carp)Imported
Taxonomic identifieri7962 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeCyprinus

Subcellular locationi

Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ90320.
SMRiQ90320. Positions 151-213.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains homeobox DNA-binding domain.SAAS annotation

Keywords - Domaini

HomeoboxUniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG005302.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR006820. Caudal_activation_dom.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
[Graphical view]
PfamiPF04731. Caudal_act. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
PR00031. HTHREPRESSR.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q90320 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYVGYLLDKE GSMYHQGSVR RSGISLPPQN FVSTPQYSDF TGYHHVPNMD
60 70 80 90 100
THAQSAGAWG PPYGAPREDW GAYSLGPPNT ISAPMSSSSP GQVSYCSSDY
110 120 130 140 150
NAMHGPGSAV LPPPPENISV GQLSPERERR NSYQWMSKTV QSSSTGKTRT
160 170 180 190 200
KEKYRVVYTD HQRLELEKEF HFNRYITIRR KSELAVNLGL SERQVKIWFQ
210 220 230 240 250
NRRAKERKLI KKKLGVSDGS GGSVHSDPGS VSPLPVPGVT ESVRHTRFSV
260 270 280 290 300
PTPRNERLTI YEEHTASYCH SVNSNLKDPT LTEHSNTLKG QNRSGPLAWT
310 320
KRITNYYTTG IKARVVDYHR RITS
Length:324
Mass (Da):36,387
Last modified:November 1, 1996 - v1
Checksum:i0E092B545E1D9538
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X80668 mRNA. Translation: CAA56695.1.
PIRiI50125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X80668 mRNA. Translation: CAA56695.1 .
PIRi I50125.

3D structure databases

ProteinModelPortali Q90320.
SMRi Q90320. Positions 151-213.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

HOVERGENi HBG005302.

Family and domain databases

Gene3Di 1.10.10.60. 1 hit.
InterProi IPR006820. Caudal_activation_dom.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
IPR000047. HTH_motif.
[Graphical view ]
Pfami PF04731. Caudal_act. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view ]
PRINTSi PR00024. HOMEOBOX.
PR00031. HTHREPRESSR.
SMARTi SM00389. HOX. 1 hit.
[Graphical view ]
SUPFAMi SSF46689. SSF46689. 1 hit.
PROSITEi PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Expression of carp-cdx1, a caudal homolog, in embryos of the carp, Cyprinus carpio."
    Stroband H.W.J., Stevens C., te Kronnie G., Samallo J., Schipper H., Kramer B., Timmermans L.P.M.
    Roux's Arch. Dev. Biol. 204:369-377(1995)
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Whole embryoImported.

Entry informationi

Entry nameiQ90320_CYPCA
AccessioniPrimary (citable) accession number: Q90320
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)