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Q90201

- Q90201_PAVHB

UniProt

Q90201 - Q90201_PAVHB

Protein
Submitted name:

VP2

Gene
N/A
Organism
Human parvovirus B19 (HPV B19)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    VP2Imported
    OrganismiHuman parvovirus B19 (HPV B19)Imported
    Taxonomic identifieri10798 [NCBI]
    Taxonomic lineageiVirusesssDNA virusesParvoviridaeParvovirinaeErythroparvovirus
    Virus hostiHomo sapiens (Human) [TaxID: 9606]

    Subcellular locationi

    GO - Cellular componenti

    1. viral capsid Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1S58X-ray3.50A1-554[»]
    ProteinModelPortaliQ90201.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ90201.

    Family & Domainsi

    Family and domain databases

    Gene3Di2.170.30.10. 1 hit.
    InterProiIPR016184. Capsid/spike_ssDNA_virus.
    IPR001403. Parvovirus_coat.
    [Graphical view]
    PfamiPF00740. Parvo_coat. 1 hit.
    [Graphical view]
    SUPFAMiSSF88645. SSF88645. 1 hit.

    Sequencei

    Sequence statusi: Fragment.

    Q90201-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSVNSAEAS TGAGGGGSNP VKSMWSEGAT FSANSVTCTF SRQFLIPYDP    50
    EHHYKVFSPA ASSCHNASGK EAKVCTISPI MGYSTPWRYL DFNALNLFFS 100
    PLEFQHLIEN YGSIAPDALT VTISEIAVKD VTDKTGGGVQ VTDSTTGRLC 150
    MLVDHEYKYP YVLGQGQDTL APELPIWVYF PPQYAYLTVG DVNTQGISGD 200
    SKKLASEESA FYVLEHSSFQ LLGTGGTATM SYKFPPVPPE NLEGCSQHFY 250
    EMYNPLYGSR LGVPDTLGGD PKFRSLTHED HAIQPQNFMP GPLVNSVSTK 300
    EGDSSNTGAG KALTGLSTGT SQNTRISLRP GPVSQPYHHW DTDKYVTGIN 350
    AISHGQTTYG NAEDKEYQQG VGRFPNEKEQ LKQLQGLNMH TYFPNKGTQQ 400
    YTDQIERPLM VGSVWNRRAL HYESQLWSKI PNLDDSFKTQ FAALGGWGLH 450
    QPPPQIFLKI LPQSGPIGGI KSMGITTLVQ YAVGIMTVTM TFKLGPRKAT 500
    GRWNPQPGVY PPHAAGHLPY VLYDPTATDA KQHHRHGYEK PEELWTAKSR 550
    VHPL 554
    Length:554
    Mass (Da):60,853
    Last modified:November 1, 1996 - v1
    Checksum:i98FE598FF20CB66F
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei554 – 5541Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U53595 Genomic DNA. Translation: AAB47453.1.
    RefSeqiYP_004928148.1. NC_000883.2.

    Genome annotation databases

    GeneIDi11293627.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U53595 Genomic DNA. Translation: AAB47453.1 .
    RefSeqi YP_004928148.1. NC_000883.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1S58 X-ray 3.50 A 1-554 [» ]
    ProteinModelPortali Q90201.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 11293627.

    Miscellaneous databases

    EvolutionaryTracei Q90201.

    Family and domain databases

    Gene3Di 2.170.30.10. 1 hit.
    InterProi IPR016184. Capsid/spike_ssDNA_virus.
    IPR001403. Parvovirus_coat.
    [Graphical view ]
    Pfami PF00740. Parvo_coat. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88645. SSF88645. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genetic diversity of human parvovirus B19: sequence analysis of the VP1/VP2 gene from multiple isolates."
      Erdman D.D., Durigon E.L., Wang Q.Y., Anderson L.J.
      J. Gen. Virol. 77:2767-2774(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS).

    Entry informationi

    Entry nameiQ90201_PAVHB
    AccessioniPrimary (citable) accession number: Q90201
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3