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Q90201 (Q90201_PAVHB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismHuman parvovirus B19 (HPV B19) EMBL AAB47453.1
Taxonomic identifier10798 [NCBI]
Taxonomic lineageVirusesssDNA virusesParvoviridaeParvovirinaeErythrovirus
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length554 AA.
Sequence statusFragment.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 1S58
Gene Ontology (GO)
   Cellular_componentviral capsid

Inferred from electronic annotation. Source: InterPro

   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5541 EMBL AAB47453.1

Sequences

Sequence LengthMass (Da)Tools
Q90201 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 98FE598FF20CB66F

FASTA55460,853
        10         20         30         40         50         60 
MTSVNSAEAS TGAGGGGSNP VKSMWSEGAT FSANSVTCTF SRQFLIPYDP EHHYKVFSPA 

        70         80         90        100        110        120 
ASSCHNASGK EAKVCTISPI MGYSTPWRYL DFNALNLFFS PLEFQHLIEN YGSIAPDALT 

       130        140        150        160        170        180 
VTISEIAVKD VTDKTGGGVQ VTDSTTGRLC MLVDHEYKYP YVLGQGQDTL APELPIWVYF 

       190        200        210        220        230        240 
PPQYAYLTVG DVNTQGISGD SKKLASEESA FYVLEHSSFQ LLGTGGTATM SYKFPPVPPE 

       250        260        270        280        290        300 
NLEGCSQHFY EMYNPLYGSR LGVPDTLGGD PKFRSLTHED HAIQPQNFMP GPLVNSVSTK 

       310        320        330        340        350        360 
EGDSSNTGAG KALTGLSTGT SQNTRISLRP GPVSQPYHHW DTDKYVTGIN AISHGQTTYG 

       370        380        390        400        410        420 
NAEDKEYQQG VGRFPNEKEQ LKQLQGLNMH TYFPNKGTQQ YTDQIERPLM VGSVWNRRAL 

       430        440        450        460        470        480 
HYESQLWSKI PNLDDSFKTQ FAALGGWGLH QPPPQIFLKI LPQSGPIGGI KSMGITTLVQ 

       490        500        510        520        530        540 
YAVGIMTVTM TFKLGPRKAT GRWNPQPGVY PPHAAGHLPY VLYDPTATDA KQHHRHGYEK 

       550 
PEELWTAKSR VHPL 

« Hide

References

[1]"Genetic diversity of human parvovirus B19: sequence analysis of the VP1/VP2 gene from multiple isolates."
Erdman D.D., Durigon E.L., Wang Q.Y., Anderson L.J.
J. Gen. Virol. 77:2767-2774(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The structure of human parvovirus B19."
Kaufmann B., Simpson A.A., Rossmann M.G.
Proc. Natl. Acad. Sci. U.S.A. 101:11628-11633(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U53595 Genomic DNA. Translation: AAB47453.1.
RefSeqYP_004928148.1. NC_000883.2.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1S58X-ray3.50A1-554[»]
ProteinModelPortalQ90201.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11293627.

Family and domain databases

Gene3D2.170.30.10. 1 hit.
InterProIPR016184. Capsid/spike_ssDNA_virus.
IPR001403. Parvovirus_coat.
[Graphical view]
PfamPF00740. Parvo_coat. 1 hit.
[Graphical view]
SUPFAMSSF88645. SSF88645. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ90201.

Entry information

Entry nameQ90201_PAVHB
AccessionPrimary (citable) accession number: Q90201
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 16, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)