Carbonic anhydrase - Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

Preferred order of sections

Names and origin

Protein names

Recommended name:
Carbonic anhydrase RuleBase RU003956
EC=4.2.1.1 RuleBase RU003956

Gene names

Name:	yadF EMBL AAL19135.1
Ordered Locus Names:	STM0171 EMBL AAL19135.1

Organism

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) [Reference proteome] [HAMAP] EMBL AAL19135.1

Taxonomic identifier

99287 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Salmonella ›

Protein attributes

Sequence length	220 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Catalytic activity	H₂CO₃ = CO₂ + H₂O. RuleBase RU003956
Sequence similarities	Belongs to the beta-class carbonic anhydrase family. RuleBase RU003956

Ontologies

Keywords
Ligand	Metal-binding PDB 3QY1 Zinc RuleBase RU003956 PDB 3QY1
Molecular function	Lyase RuleBase RU003956 EMBL AAL19135.1
Technical term	3D-structure PDB 3QY1 Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbon utilization Inferred from electronic annotation. Source: InterPro
Molecular_function	carbonate dehydratase activity Inferred from electronic annotation. Source: UniProtKB-EC zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

42

1

Zinc PDB 3QY1

Metal binding

44

1

Zinc PDB 3QY1

Metal binding

98

1

Zinc; via tele nitrogen PDB 3QY1

Metal binding

101

1

Zinc PDB 3QY1

Sequences

Sequence

Length

Mass (Da)

Tools

Q8ZRS0 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 66554450930596DD
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FASTA

220

24,821

        10         20         30         40         50         60 
MKDIDTLISN NALWSKMLVE EDPGFFEKLA QAQKPRFLWI GCSDSRVPAE RLTGLEPGEL 

        70         80         90        100        110        120 
FVHRNVANLV IHTDLNCLSV VQYAVDVLEV EHIIICGHSG CGGIKAAVEN PELGLINNWL 

       130        140        150        160        170        180 
LHIRDIWLKH SSLLGKMPEE QRLDALYELN VMEQVYNLGH STIMQSAWKR GQNVTIHGWA 

       190        200        210        220 
YSINDGLLRD LDVTATNRET LENGYHKGIS ALSLKYIPHQ

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References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Salmonella enterica serovar Typhimurium LT2." McClelland M., Sanderson K.E., Spieth J., Clifton S.W., Latreille P., Courtney L., Porwollik S., Ali J., Dante M., Du F., Hou S., Layman D., Leonard S., Nguyen C., Scott K., Holmes A., Grewal N., Mulvaney E. Wilson R.K. Nature 413:852-856(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LT2 / SGSC1412 / ATCC 700720.
[2]	"1.54A Resolution Crystal Structure of a Beta-Carbonic Anhydrase from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2." Center for Structural Genomics of Infectious Diseases (CSGID) Brunzelle J.S., Wawrzak Z., Onopriyenko O., Anderson W.F., Savchenko A. Submitted (MAR-2011) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.54 ANGSTROMS) IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE006468 Genomic DNA. Translation: AAL19135.1.

RefSeq

NP_459176.1. NC_003197.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3QY1	X-ray	1.54	A/B	1-220	[»]

ProteinModelPortal

Q8ZRS0.

SMR

Q8ZRS0. Positions 2-215.

ModBase

Search...

Protein-protein interaction databases

STRING

99287.STM0171.

Proteomic databases

PRIDE

Q8ZRS0.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

AAL19135; AAL19135; STM0171.

GeneID

1251689.

KEGG

stm:STM0171.

PATRIC

32378623. VBISalEnt20916_0181.

Phylogenomic databases

HOGENOM

HOG000125184.

KO

K01673.

OMA

VQEAWAR.

OrthoDB

EOG6FFSB8.

ProtClustDB

PRK10437.

Enzyme and pathway databases

BioCyc

SENT99287:GCTI-170-MONOMER.

Family and domain databases

Gene3D

3.40.1050.10. 1 hit.

InterPro

IPR001765. Carbonic_anhydrase.
IPR015892. Carbonic_anhydrase_CS.
[Graphical view]

PANTHER

PTHR11002. PTHR11002. 1 hit.

Pfam

PF00484. Pro_CA. 1 hit.
[Graphical view]

SMART

SM00947. Pro_CA. 1 hit.
[Graphical view]

SUPFAM

SSF53056. SSF53056. 1 hit.

PROSITE

PS00704. PROK_CO2_ANHYDRASE_1. 1 hit.
PS00705. PROK_CO2_ANHYDRASE_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

Q8ZRS0.

Entry information

Entry name

Q8ZRS0_SALTY

Accession

Primary (citable) accession number: Q8ZRS0

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	November 13, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)