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Protein
Submitted name:

Putative fimbriae assembly chaparone

Gene

safB

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ChaperoneUniRule annotation

Enzyme and pathway databases

BioCyciSENT99287:GCTI-302-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative fimbriae assembly chaparoneImported
Gene namesi
Name:safBImported
Ordered Locus Names:STM0300Imported
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Imported
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

Subcellular locationi

  • Periplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi112 ↔ 141Combined sources

Proteomic databases

PaxDbiQ8ZRK3.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM0300.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2CO6X-ray2.00B17-237[»]
2CO7X-ray1.80B17-237[»]
ProteinModelPortaliQ8ZRK3.
SMRiQ8ZRK3. Positions 21-236.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8ZRK3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 151122PapD_NInterPro annotationAdd
BLAST
Domaini173 – 22957PapD_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the periplasmic pilus chaperone family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UIF. Bacteria.
COG3121. LUCA.
HOGENOMiHOG000260152.
OMAiCLRRNTH.
OrthoDBiEOG6SNDR4.
PhylomeDBiQ8ZRK3.

Family and domain databases

Gene3Di2.60.40.1070. 1 hit.
2.60.40.360. 1 hit.
InterProiIPR008962. PapD-like.
IPR001829. Pili_assmbl_chaperone_bac.
IPR016148. Pili_assmbl_chaperone_C.
IPR018046. Pili_assmbl_chaperone_CS.
IPR016147. Pili_assmbl_chaperone_N.
[Graphical view]
PfamiPF02753. PapD_C. 1 hit.
PF00345. PapD_N. 1 hit.
[Graphical view]
PRINTSiPR00969. CHAPERONPILI.
SUPFAMiSSF49354. SSF49354. 1 hit.
SSF49584. SSF49584. 1 hit.
PROSITEiPS00635. PILI_CHAPERONE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8ZRK3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVALFATNS MVSVYAVNQQ LNSATKLFSV KLGATRVIYH AGTAGATLSV
60 70 80 90 100
SNPQNYPILV QSSVKAADKS SPAPFLVMPP LFRLEANQQS QLRIVRTGGD
110 120 130 140 150
MPTDRETLQW VCIKAVPPEN EPSDTQAKGA TLDLNLSINA CDKLIFRPDA
160 170 180 190 200
VKGTPEDVAG NLRWVETGNK LKVENPTPFY MNLASVTVGG KPITGLEYVP
210 220 230
PFADKTLNMP GSAHGDIEWR VITDFGGESH PFHYVLK
Length:237
Mass (Da):25,655
Last modified:March 1, 2002 - v1
Checksum:i8370DB0A6AB32EE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL19257.1.
RefSeqiNP_459298.1. NC_003197.1.
WP_000257370.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL19257; AAL19257; STM0300.
GeneIDi1251819.
KEGGistm:STM0300.
PATRICi32378909. VBISalEnt20916_0317.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL19257.1.
RefSeqiNP_459298.1. NC_003197.1.
WP_000257370.1. NC_003197.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2CO6X-ray2.00B17-237[»]
2CO7X-ray1.80B17-237[»]
ProteinModelPortaliQ8ZRK3.
SMRiQ8ZRK3. Positions 21-236.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM0300.

Proteomic databases

PaxDbiQ8ZRK3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL19257; AAL19257; STM0300.
GeneIDi1251819.
KEGGistm:STM0300.
PATRICi32378909. VBISalEnt20916_0317.

Phylogenomic databases

eggNOGiENOG4108UIF. Bacteria.
COG3121. LUCA.
HOGENOMiHOG000260152.
OMAiCLRRNTH.
OrthoDBiEOG6SNDR4.
PhylomeDBiQ8ZRK3.

Enzyme and pathway databases

BioCyciSENT99287:GCTI-302-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8ZRK3.

Family and domain databases

Gene3Di2.60.40.1070. 1 hit.
2.60.40.360. 1 hit.
InterProiIPR008962. PapD-like.
IPR001829. Pili_assmbl_chaperone_bac.
IPR016148. Pili_assmbl_chaperone_C.
IPR018046. Pili_assmbl_chaperone_CS.
IPR016147. Pili_assmbl_chaperone_N.
[Graphical view]
PfamiPF02753. PapD_C. 1 hit.
PF00345. PapD_N. 1 hit.
[Graphical view]
PRINTSiPR00969. CHAPERONPILI.
SUPFAMiSSF49354. SSF49354. 1 hit.
SSF49584. SSF49584. 1 hit.
PROSITEiPS00635. PILI_CHAPERONE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720Imported.
  2. "Donor-strand exchange in chaperone-assisted pilus assembly proceeds through a concerted beta strand displacement mechanism."
    Remaut H., Rose R.J., Hannan T.J., Hultgren S.J., Radford S.E., Ashcroft A.E., Waksman G.
    Mol. Cell 22:831-842(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 17-237, DISULFIDE BONDS.

Entry informationi

Entry nameiQ8ZRK3_SALTY
AccessioniPrimary (citable) accession number: Q8ZRK3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: March 16, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.