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Protein
Submitted name:

Putative DNA-binding protein

Gene

STM3071

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingImported

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3091-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA-binding proteinImported
Gene namesi
Ordered Locus Names:STM3071Imported
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Imported
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ8ZM67.
PRIDEiQ8ZM67.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM3071.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NMUX-ray1.80A1-141[»]
ProteinModelPortaliQ8ZM67.
SMRiQ8ZM67. Positions 5-141.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8ZM67.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 139132PPCInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG41063R7. Bacteria.
COG1661. LUCA.
HOGENOMiHOG000206104.
KOiK06934.
OMAiTLTPEHQ.
OrthoDBiEOG64R664.

Family and domain databases

InterProiIPR005175. PPC_dom.
[Graphical view]
PfamiPF03479. DUF296. 1 hit.
[Graphical view]
PROSITEiPS51742. PPC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8ZM67-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVSHHNAST ARFYALRLLP GQEVFSQLHA FVQQNQLRAA WIAGCTGSLT
60 70 80 90 100
DVALRYAGQE ATTSLTGTFE VISLNGTLEL TGEHLHLAVS DPYGVMLGGH
110 120 130 140
MMPGCTVRTT LELVIGELPA LTFSRQPCAI SGYDELHISS R
Length:141
Mass (Da):15,230
Last modified:March 1, 2002 - v1
Checksum:iA88A808260215D44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL21946.1.
RefSeqiNP_461987.1. NC_003197.1.
WP_000218569.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL21946; AAL21946; STM3071.
GeneIDi1254594.
KEGGistm:STM3071.
PATRICi32384891. VBISalEnt20916_3254.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL21946.1.
RefSeqiNP_461987.1. NC_003197.1.
WP_000218569.1. NC_003197.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NMUX-ray1.80A1-141[»]
ProteinModelPortaliQ8ZM67.
SMRiQ8ZM67. Positions 5-141.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM3071.

Proteomic databases

PaxDbiQ8ZM67.
PRIDEiQ8ZM67.

Protocols and materials databases

DNASUi1254594.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL21946; AAL21946; STM3071.
GeneIDi1254594.
KEGGistm:STM3071.
PATRICi32384891. VBISalEnt20916_3254.

Phylogenomic databases

eggNOGiENOG41063R7. Bacteria.
COG1661. LUCA.
HOGENOMiHOG000206104.
KOiK06934.
OMAiTLTPEHQ.
OrthoDBiEOG64R664.

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3091-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8ZM67.

Family and domain databases

InterProiIPR005175. PPC_dom.
[Graphical view]
PfamiPF03479. DUF296. 1 hit.
[Graphical view]
PROSITEiPS51742. PPC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LT2 / SGSC1412 / ATCC 700720Imported.
  2. "Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127."
    Kuzin A.P., Abashidze M., Seetharaman J., Wang H., Nwosu C., Cunningham K., Ma L.C., Xiao R., Liu J., Baran M.C., Acton T.B., Rost B., Montelione G., Tong L., Hunt J.F.
    Submitted (OCT-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS).

Entry informationi

Entry nameiQ8ZM67_SALTY
AccessioniPrimary (citable) accession number: Q8ZM67
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: March 16, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.