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Protein
Submitted name:

Putative DNA-binding protein

Gene

STM3071

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingImported

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3091-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA-binding proteinImported
Gene namesi
Ordered Locus Names:STM3071Imported
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Imported
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ8ZM67.
PRIDEiQ8ZM67.

Interactioni

Protein-protein interaction databases

STRINGi99287.STM3071.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NMUX-ray1.80A1-141[»]
ProteinModelPortaliQ8ZM67.
SMRiQ8ZM67. Positions 5-141.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8ZM67.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 139132PPCInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG41063R7. Bacteria.
COG1661. LUCA.
HOGENOMiHOG000206104.
KOiK06934.
OMAiTLTPEHQ.

Family and domain databases

CDDicd11378. DUF296. 1 hit.
InterProiIPR005175. PPC_dom.
[Graphical view]
PfamiPF03479. DUF296. 1 hit.
[Graphical view]
PROSITEiPS51742. PPC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8ZM67-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVSHHNAST ARFYALRLLP GQEVFSQLHA FVQQNQLRAA WIAGCTGSLT
60 70 80 90 100
DVALRYAGQE ATTSLTGTFE VISLNGTLEL TGEHLHLAVS DPYGVMLGGH
110 120 130 140
MMPGCTVRTT LELVIGELPA LTFSRQPCAI SGYDELHISS R
Length:141
Mass (Da):15,230
Last modified:March 1, 2002 - v1
Checksum:iA88A808260215D44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL21946.1.
RefSeqiNP_461987.1. NC_003197.1.
WP_000218569.1. NC_003197.1.

Genome annotation databases

EnsemblBacteriaiAAL21946; AAL21946; STM3071.
GeneIDi1254594.
KEGGistm:STM3071.
PATRICi32384891. VBISalEnt20916_3254.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA. Translation: AAL21946.1.
RefSeqiNP_461987.1. NC_003197.1.
WP_000218569.1. NC_003197.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2NMUX-ray1.80A1-141[»]
ProteinModelPortaliQ8ZM67.
SMRiQ8ZM67. Positions 5-141.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi99287.STM3071.

Proteomic databases

PaxDbiQ8ZM67.
PRIDEiQ8ZM67.

Protocols and materials databases

DNASUi1254594.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL21946; AAL21946; STM3071.
GeneIDi1254594.
KEGGistm:STM3071.
PATRICi32384891. VBISalEnt20916_3254.

Phylogenomic databases

eggNOGiENOG41063R7. Bacteria.
COG1661. LUCA.
HOGENOMiHOG000206104.
KOiK06934.
OMAiTLTPEHQ.

Enzyme and pathway databases

BioCyciSENT99287:GCTI-3091-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ8ZM67.

Family and domain databases

CDDicd11378. DUF296. 1 hit.
InterProiIPR005175. PPC_dom.
[Graphical view]
PfamiPF03479. DUF296. 1 hit.
[Graphical view]
PROSITEiPS51742. PPC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8ZM67_SALTY
AccessioniPrimary (citable) accession number: Q8ZM67
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: September 7, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.