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Protein

Probable transcriptional regulatory protein YeeN

Gene

yeeN

Organism
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciSENT99287:G1FZD-4540-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transcriptional regulatory protein YeeNUniRule annotation
Gene namesi
Name:yeeNUniRule annotation
Ordered Locus Names:STM4499
OrganismiSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Taxonomic identifieri99287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001014 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001758861 – 238Probable transcriptional regulatory protein YeeNAdd BLAST238

Proteomic databases

PaxDbiQ8ZK08
PRIDEiQ8ZK08

Interactioni

Protein-protein interaction databases

STRINGi99287.STM4499

Structurei

3D structure databases

ProteinModelPortaliQ8ZK08
SMRiQ8ZK08
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TACO1 family. YeeN subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CDY Bacteria
COG0217 LUCA
HOGENOMiHOG000228371
OMAiCAKNGGF
PhylomeDBiQ8ZK08

Family and domain databases

Gene3Di1.10.10.200, 1 hit
3.30.70.980, 3 hits
HAMAPiMF_00693 Transcrip_reg_TACO1, 1 hit
MF_00918 Transcrip_reg_TACO1_YeeN, 1 hit
InterProiView protein in InterPro
IPR017856 Integrase-like_N
IPR002876 Transcrip_reg_TACO1-like
IPR026564 Transcrip_reg_TACO1-like_dom3
IPR026562 Transcrip_reg_TACO1_YeeN
IPR029072 YebC-like
PANTHERiPTHR12532 PTHR12532, 1 hit
PfamiView protein in Pfam
PF01709 Transcrip_reg, 1 hit
SUPFAMiSSF75625 SSF75625, 1 hit
TIGRFAMsiTIGR01033 TIGR01033, 1 hit

Sequencei

Sequence statusi: Complete.

Q8ZK08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKWANIVA KKTAKDGATS KVYAKFGVEI YAAAKQGEPD PESNSALKFV
60 70 80 90 100
IERAKQAQVP KHVIDKAIDK AKGGGDETFV QGRYEGFGPN GSMVIAETLT
110 120 130 140 150
SNVNRTIANI RTIFNKKGGN IGAAGAVSYM FDNTGVIVFK GTDPDHIFEI
160 170 180 190 200
LLDAEVDVRD VTEEEGNIVI YTEATDLHKG IAALKAAGIS EFSTTELEMI
210 220 230
AQSEVELSPE DLEIFEGLVD ALEDDDDVQK VYHNVANL
Length:238
Mass (Da):25,727
Last modified:June 21, 2004 - v2
Checksum:i6BB9B777492307A7
GO

Sequence cautioni

The sequence AAL23317 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006468 Genomic DNA Translation: AAL23317.1 Different initiation.
RefSeqiNP_463358.3, NC_003197.2

Genome annotation databases

EnsemblBacteriaiAAL23317; AAL23317; STM4499
GeneIDi1256025
KEGGistm:STM4499
PATRICifig|99287.12.peg.4735

Similar proteinsi

Entry informationi

Entry nameiYEEN_SALTY
AccessioniPrimary (citable) accession number: Q8ZK08
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 4, 2003
Last sequence update: June 21, 2004
Last modified: May 23, 2018
This is version 92 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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