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Protein

HTH-type transcriptional regulator MalT

Gene

malT

Organism
Yersinia pestis
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box): 5'-GGA[TG]GA-3'.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi39 – 468ATPUniRule annotation
DNA bindingi856 – 87520H-T-H motifUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Carbohydrate metabolism, Transcription, Transcription regulation

Keywords - Ligandi

ATP-binding, DNA-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciYPES214092:GKDD-124-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator MalTUniRule annotation
Alternative name(s):
ATP-dependent transcriptional activator MalTUniRule annotation
Gene namesi
Name:malTUniRule annotation
Ordered Locus Names:YPO0123, y3900, YP_0125
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Chromosome
  • UP000001019 Componenti: Chromosome
  • UP000002490 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 903903HTH-type transcriptional regulator MalTPRO_0000184173Add
BLAST

Proteomic databases

PRIDEiQ8ZJI2.

Interactioni

Subunit structurei

Monomer in solution but oligomerizes to an active state in the presence of the positive effectors ATP and maltotriose.UniRule annotation

Protein-protein interaction databases

IntActiQ8ZJI2. 2 interactions.
STRINGi187410.y3900.

Structurei

3D structure databases

ProteinModelPortaliQ8ZJI2.
SMRiQ8ZJI2. Positions 447-806.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini832 – 89766HTH luxR-typeUniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41061ZR. Bacteria.
COG2909. LUCA.
HOGENOMiHOG000218261.
KOiK03556.
OMAiSDWVSNA.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
HAMAPiMF_01247. HTH_type_MalT.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR023768. Tscrpt_reg_HTH_MalT.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF48452. SSF48452. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8ZJI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLIPSKLSRP VRLQNTVVRD RLLVKLSSAA NYRLTLINCP AGYGKTTLIA
60 70 80 90 100
QWAADQSNLG WYSLDESDNQ SERFATYLIA AIQLATGGHC SKSEALSQKH
110 120 130 140 150
QYANLSALFS QLFIELSNWD GPLYLVIDDY HLITNDAIHE AMRFFLRHQP
160 170 180 190 200
ENLTLIILSR TLPSLGIANL RVRDQLLELG MQQLAFNHHE AQQFFECRLS
210 220 230 240 250
SPLEQGDSSR LCDEVEGWVT ALQLIALSSR QPNSSAQKSA KRLAGLNASH
260 270 280 290 300
LSDYLVDEVL DQVDSKARAF LLRCSVLRSM NDALIVRLTG EDNGQQLLEE
310 320 330 340 350
LERQGLFIHR MDDSAEWFCF HPLFATFLRQ RCQWELALEL PELHHAAAEG
360 370 380 390 400
WMALGYPAEA IHHALAAGDV GMLRDILLQH AWSLFHHSEL ALLEQCLTAL
410 420 430 440 450
PYPLLVQNPE LALLQAWLAQ SQHRYSEVNT LLEQAELAMQ ERKIPVDEIL
460 470 480 490 500
RAEFGALRAQ VAINAGKPDE AEKLATDALK YLPMAHYYSR IVATSVTGEV
510 520 530 540 550
HHCKGELARA LPMMQQTEQM ARRHEAYHYA LWALLQQSEI LIAQGFLQAA
560 570 580 590 600
YETQEKAFEL IREQHLEQLP MHEFLLRIRS QVLWSWSRLD EAEEAARKGV
610 620 630 640 650
EILANYQPQQ QLQCLAMLAK CSLARGDLDN ANVYIQRCEA LQHGSQYHLD
660 670 680 690 700
WITNADKPRV IHWQMTGDKV AAASWLRQTE KPGMADNHFL QGQWRNIARV
710 720 730 740 750
QIILGRFDEA EVVLDELNEN ARRLRLTSDL NRNLLLSNTL YWQTERKGEA
760 770 780 790 800
QKALIESLTL ANRTGFISHF VIEGEAMAQQ LRQLIQLNAL PELEQHRAQR
810 820 830 840 850
ILKDINQHHR HKFAHFDEIF VDKLLTHPQV PELIRTSPLT QREWQVLGLI
860 870 880 890 900
YSGYSNDQIA NELDVAATTI KTHIRNLYQK LGVAHRQEAV QQAQRLLQMM

GYV
Length:903
Mass (Da):103,165
Last modified:March 1, 2002 - v1
Checksum:i728A538719E42251
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL590842 Genomic DNA. Translation: CAL18810.1.
AE009952 Genomic DNA. Translation: AAM87445.1.
AE017042 Genomic DNA. Translation: AAS60404.1.
PIRiAI0015.
RefSeqiWP_002208926.1. NZ_LQAY01000022.1.
YP_002345211.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM87445; AAM87445; y3900.
AAS60404; AAS60404; YP_0125.
GeneIDi1172970.
KEGGiype:YPO0123.
ypk:y3900.
ypl:CH46_793.
ypm:YP_0125.
ypv:BZ15_3445.
ypw:CH59_2215.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL590842 Genomic DNA. Translation: CAL18810.1.
AE009952 Genomic DNA. Translation: AAM87445.1.
AE017042 Genomic DNA. Translation: AAS60404.1.
PIRiAI0015.
RefSeqiWP_002208926.1. NZ_LQAY01000022.1.
YP_002345211.1. NC_003143.1.

3D structure databases

ProteinModelPortaliQ8ZJI2.
SMRiQ8ZJI2. Positions 447-806.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8ZJI2. 2 interactions.
STRINGi187410.y3900.

Proteomic databases

PRIDEiQ8ZJI2.

Protocols and materials databases

DNASUi1148847.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM87445; AAM87445; y3900.
AAS60404; AAS60404; YP_0125.
GeneIDi1172970.
KEGGiype:YPO0123.
ypk:y3900.
ypl:CH46_793.
ypm:YP_0125.
ypv:BZ15_3445.
ypw:CH59_2215.

Phylogenomic databases

eggNOGiENOG41061ZR. Bacteria.
COG2909. LUCA.
HOGENOMiHOG000218261.
KOiK03556.
OMAiSDWVSNA.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-124-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
HAMAPiMF_01247. HTH_type_MalT.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR023768. Tscrpt_reg_HTH_MalT.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF48452. SSF48452. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92 / Biovar Orientalis.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIM10+ / Biovar Mediaevalis.
  3. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001 / Biovar Mediaevalis.

Entry informationi

Entry nameiMALT_YERPE
AccessioniPrimary (citable) accession number: Q8ZJI2
Secondary accession number(s): Q0WKH7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: March 1, 2002
Last modified: July 6, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.