Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0246 protein YaaA

Gene

yaaA

Organism
Salmonella typhi
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0246 protein YaaAUniRule annotation
Gene namesi
Name:yaaAUniRule annotation
Ordered Locus Names:STY0005, t0005
OrganismiSalmonella typhi
Taxonomic identifieri90370 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000002670 Componenti: Chromosome
  • UP000000541 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 257257UPF0246 protein YaaAPRO_0000204001Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi220341.STY0005.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0246 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D1Q. Bacteria.
COG3022. LUCA.
HOGENOMiHOG000218488.
KOiK09861.
OMAiGLMARYI.
OrthoDBiEOG6423KT.

Family and domain databases

HAMAPiMF_00652. UPF0246.
InterProiIPR005583. YaaA.
[Graphical view]
PfamiPF03883. DUF328. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8Z9R5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLILISPAKT LDYQSPLATT RYTQPELLDH SQQLIQQARQ LSAPQISRLM
60 70 80 90 100
GISDKLADLN ATRFHDWQPH FTPDNARQAI LAFKGDVYTG LQAETFNDAD
110 120 130 140 150
FDFAQQHLRM LSGLYGVLRP LDLMQPYRLE MGIRLENPRG KDLYQFWGDI
160 170 180 190 200
ITDKLNEALE AQGDRVVVNL ASEEYFKSVK PKKLDAELIK PVFLDEKNGK
210 220 230 240 250
FKVVSFYAKK ARGLMSRFII ENRLTKPEQL TAFDREGYFF DEETSTQDEL

VFKRYEQ
Length:257
Mass (Da):29,765
Last modified:March 1, 2002 - v1
Checksum:i4953881DFACF9A61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL513382 Genomic DNA. Translation: CAD01158.1.
AE014613 Genomic DNA. Translation: AAO67739.1.
RefSeqiNP_454615.1. NC_003198.1.
WP_000906171.1. NZ_LUHL01000022.1.

Genome annotation databases

EnsemblBacteriaiAAO67739; AAO67739; t0005.
CAD01158; CAD01158; CAD01158.
GeneIDi1246516.
KEGGistt:t0005.
sty:STY0005.
PATRICi18537821. VBISalEnt120419_0004.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL513382 Genomic DNA. Translation: CAD01158.1.
AE014613 Genomic DNA. Translation: AAO67739.1.
RefSeqiNP_454615.1. NC_003198.1.
WP_000906171.1. NZ_LUHL01000022.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi220341.STY0005.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO67739; AAO67739; t0005.
CAD01158; CAD01158; CAD01158.
GeneIDi1246516.
KEGGistt:t0005.
sty:STY0005.
PATRICi18537821. VBISalEnt120419_0004.

Phylogenomic databases

eggNOGiENOG4105D1Q. Bacteria.
COG3022. LUCA.
HOGENOMiHOG000218488.
KOiK09861.
OMAiGLMARYI.
OrthoDBiEOG6423KT.

Family and domain databases

HAMAPiMF_00652. UPF0246.
InterProiIPR005583. YaaA.
[Graphical view]
PfamiPF03883. DUF328. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CT18.
  2. "Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18."
    Deng W., Liou S.-R., Plunkett G. III, Mayhew G.F., Rose D.J., Burland V., Kodoyianni V., Schwartz D.C., Blattner F.R.
    J. Bacteriol. 185:2330-2337(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700931 / Ty2.

Entry informationi

Entry nameiYAAA_SALTI
AccessioniPrimary (citable) accession number: Q8Z9R5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 16, 2003
Last sequence update: March 1, 2002
Last modified: July 6, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.