Q8YSC4 (Q8YSC4_NOSS1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Bacteriorhodopsin EMBL BAB74864.1

Gene names

Ordered Locus Names:

alr3165

Organism

Nostoc sp. (strain PCC 7120 / UTEX 2576) [Complete proteome] [HAMAP]

Taxonomic identifier

103690 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Nostoc

Protein attributes

Sequence length	261 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 1XIO Complete proteome
Gene Ontology (GO)
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	ion channel activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8YSC4 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 0791240FEDE9B148	FASTA	261	30,191
	10 20 30 40 50 60 MNLESLLHWI YVAGMTIGAL HFWSLSRNPR GVPQYEYLVA MFIPIWSGLA YMAMAIDQGK 70 80 90 100 110 120 VEAAGQIAHY ARYIDWMVTT PLLLLSLSWT AMQFIKKDWT LIGFLMSTQI VVITSGLIAD 130 140 150 160 170 180 LSERDWVRYL WYICGVCAFL IILWGIWNPL RAKTRTQSSE LANLYDKLVT YFTVLWIGYP 190 200 210 220 230 240 IVWIIGPSGF GWINQTIDTF LFCLLPFFSK VGFSFLDLHG LRNLNDSRQT TGDRFAENTL 250 260 QFVENITLFA NSRRQQSRRR V

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120." Kaneko T., Nakamura Y., Wolk C.P., Kuritz T., Sasamoto S., Watanabe A., Iriguchi M., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakazaki N., Shimpo S., Sugimoto M. , Takazawa M., Yamada M., Yasuda M., Tabata S. DNA Res. 8:205-213(2001) [PubMed: 11759840] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 A." Vogeley L., Sineshchekov O.A., Trivedi V.D., Sasaki J., Spudich J.L., Luecke H. Science 306:1390-1393(2004) [PubMed: 15459346] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS).
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000019 Genomic DNA. Translation: BAB74864.1.

PIR

AF2201.

RefSeq

NP_487205.1. NC_003272.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1XIO	X-ray	2.00	A	1-261	[»]

ProteinModelPortal

Q8YSC4.

SMR

Q8YSC4. Positions 1-226.

ModBase

Search...

Protein-protein interaction databases

STRING

Q8YSC4.

Protein family/group databases

TCDB

3.E.1.8.1. ion-translocating microbial rhodopsin (MR) family.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

1106763.

GenomeReviews

Gene locus alr3165 in contig BA000019_GR.

KEGG

ana:alr3165.

NMPDR

fig|103690.1.peg.3472.

PATRIC

22776688. VBINosSp37423_3803.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

COG5524.

HOGENOM

HBG440674.

OMA

QIAHYAR.

PhylomeDB

Q8YSC4.

ProtClustDB

CLSK2393635.

Enzyme and pathway databases

BioCyc

NSP103690:ALR3165-MONOMER.

Family and domain databases

InterPro

IPR001425. Rhodopsin_arc/bac/fun.
IPR018229. Rhodopsin_retinal_BS.
[Graphical view]

KO

K04641.

Pfam

PF01036. Bac_rhodopsin. 1 hit.
[Graphical view]

PRINTS

PR00251. BACTRLOPSIN.

SMART

SM01021. Bac_rhodopsin. 1 hit.
[Graphical view]

PROSITE

PS00950. BACTERIAL_OPSIN_1. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8YSC4_NOSS1

Accession

Primary (citable) accession number: Q8YSC4

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	January 25, 2012
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)