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Protein

Uncharacterized WD repeat-containing protein alr3466

Gene

alr3466

Organism
Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized WD repeat-containing protein alr3466
Gene namesi
Ordered Locus Names:alr3466
OrganismiNostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Taxonomic identifieri103690 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
Proteomesi
  • UP000002483 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15261526Uncharacterized WD repeat-containing protein alr3466PRO_0000051515Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi103690.alr3466.

Structurei

3D structure databases

ProteinModelPortaliQ8YRI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati334 – 37643WD 1Add
BLAST
Domaini823 – 86240Pentapeptide repeatAdd
BLAST
Repeati862 – 90140WD 2Add
BLAST
Repeati904 – 94542WD 3Add
BLAST
Repeati946 – 98540WD 4Add
BLAST
Repeati988 – 102740WD 5Add
BLAST
Repeati1030 – 106940WD 6Add
BLAST
Repeati1072 – 111140WD 7Add
BLAST
Repeati1114 – 115340WD 8Add
BLAST
Repeati1156 – 119540WD 9Add
BLAST
Repeati1198 – 123740WD 10Add
BLAST
Repeati1240 – 127940WD 11Add
BLAST
Repeati1282 – 132140WD 12Add
BLAST
Repeati1324 – 136340WD 13Add
BLAST
Repeati1366 – 140540WD 14Add
BLAST
Repeati1408 – 144740WD 15Add
BLAST
Repeati1450 – 149142WD 16Add
BLAST

Sequence similaritiesi

Contains 1 pentapeptide repeat domain.Curated
Contains 16 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiENOG4105CNF. Bacteria.
ENOG410XP3K. LUCA.
HOGENOMiHOG000023131.
OMAiKLWNYKS.
OrthoDBiPOG091H0COA.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR001646. 5peptide_repeat.
IPR020472. G-protein_beta_WD-40_rep.
IPR007111. NACHT_NTPase.
IPR027417. P-loop_NTPase.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00805. Pentapeptide. 1 hit.
PF00400. WD40. 15 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 15 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF50998. SSF50998. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50837. NACHT. 1 hit.
PS00678. WD_REPEATS_1. 11 hits.
PS50082. WD_REPEATS_2. 15 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8YRI1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMSLINLDLV ISAVTSIANP VIKEKILRSE TVIKLLQQFN LDPEHPPADF
60 70 80 90 100
SGVYAYTLVE YGVGKPKAFL ELFRQEAIKQ AFRKALDHNN PSILLSEVDT
110 120 130 140 150
FLDACTLGDE IRSLELDVRR EVAAFATVFI EVAKRSRTPA DVLMNQQIGS
160 170 180 190 200
LHKRIAGIQE QLERLPTLEG IRTEIARLAA QNYPALTPTA TENQCRAIAL
210 220 230 240 250
AQQMRGWFET LGYRLEKYEI WAEEYFEWII NVPVRRSYDR ILVRGVAGEV
260 270 280 290 300
RLSDVMALCQ SVNQQKTDEG WLVSTRRISR AARDEVKKEE NRHLDCFTFD
310 320 330 340 350
ELIDLDADFS GYLDWLEAEI KRRKIDQKYV PLACTKEEID PVTKRRIGIS
360 370 380 390 400
RYEAEDGWID GYIDLWLDDP AKEHISILGE FGTGKTWFVF HYAWTALQRY
410 420 430 440 450
KDAQRRGVER PRLPLVITLR DFAKALNVEN VLAGFFFTQH NIRLNSEVFD
460 470 480 490 500
QLNRMGKLLL IFDGFDEMAA KVDRQQMINN FWELAKVVVP GSKVILTCRT
510 520 530 540 550
EHFPEAKEGR ALLNAELQAS TNKLTGETPQ FEVLELEKFN DEQIRQVLLY
560 570 580 590 600
QAEEATVEQI MGNSQLLDLA RRPVMTDLIL EALPDIEAGK PIDMSRVYLY
610 620 630 640 650
AVRHKMERDI KAERTFNSLA DKLYFLCELS WEMLSTDQMS LNYRLFPERI
660 670 680 690 700
RRLFGSVVQE EKDLDHWHYD MMAQTMLVRN ADGDYTPAHR SLLEFFVAYK
710 720 730 740 750
FAAELGALAR DFTEVGQAQS GLDSSTASID YTWSGYFSRQ LDSTGCREVI
760 770 780 790 800
APLRQFKSEF LDKLRETFGK AKLTKAVIDL LLPMLDDNEP LIKIIEATRG
810 820 830 840 850
RTEDEVNYVG GNAATLLVKL NKMVLEGRDL SHTVIIGADF TNTSLRCVNF
860 870 880 890 900
TEANLAYSVF TKILGSVLTV AFSPDGKLFA TGDSGGIVRF WEAATGKELL
910 920 930 940 950
TCKGHNSWVN SVGFSQDGKM LASGSDDQTV RLWDISSGQC LKTFKGHTSR
960 970 980 990 1000
VRSVVFSPNS LMLASGSSDQ TVRLWDISSG ECLYIFQGHT GWVYSVAFNL
1010 1020 1030 1040 1050
DGSMLATGSG DQTVRLWDIS SSQCFYIFQG HTSCVRSVVF SSDGAMLASG
1060 1070 1080 1090 1100
SDDQTVRLWD ISSGNCLYTL QGHTSCVRSV VFSPDGAMLA SGGDDQIVRL
1110 1120 1130 1140 1150
WDISSGNCLY TLQGYTSWVR FLVFSPNGVT LANGSSDQIV RLWDISSKKC
1160 1170 1180 1190 1200
LYTLQGHTNW VNAVAFSPDG ATLASGSGDQ TVRLWDISSS KCLYILQGHT
1210 1220 1230 1240 1250
SWVNSVVFNP DGSTLASGSS DQTVRLWEIN SSKCLCTFQG HTSWVNSVVF
1260 1270 1280 1290 1300
NPDGSMLASG SSDKTVRLWD ISSSKCLHTF QGHTNWVNSV AFNPDGSMLA
1310 1320 1330 1340 1350
SGSGDQTVRL WEISSSKCLH TFQGHTSWVS SVTFSPDGTM LASGSDDQTV
1360 1370 1380 1390 1400
RLWSISSGEC LYTFLGHTNW VGSVIFSPDG AILASGSGDQ TVRLWSISSG
1410 1420 1430 1440 1450
KCLYTLQGHN NWVGSIVFSP DGTLLASGSD DQTVRLWNIS SGECLYTLHG
1460 1470 1480 1490 1500
HINSVRSVAF SSDGLILASG SDDETIKLWD VKTGECIKTL KSEKIYEGMN
1510 1520
ITSVRGLTEV EKATLKTLGA VENREI
Length:1,526
Mass (Da):170,377
Last modified:March 1, 2002 - v1
Checksum:iD5DF272509B4A738
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000019 Genomic DNA. Translation: BAB75165.1.
PIRiAC2239.

Genome annotation databases

EnsemblBacteriaiBAB75165; BAB75165; BAB75165.
KEGGiana:alr3466.
PATRICi22777330. VBINosSp37423_4122.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000019 Genomic DNA. Translation: BAB75165.1.
PIRiAC2239.

3D structure databases

ProteinModelPortaliQ8YRI1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi103690.alr3466.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB75165; BAB75165; BAB75165.
KEGGiana:alr3466.
PATRICi22777330. VBINosSp37423_4122.

Phylogenomic databases

eggNOGiENOG4105CNF. Bacteria.
ENOG410XP3K. LUCA.
HOGENOMiHOG000023131.
OMAiKLWNYKS.
OrthoDBiPOG091H0COA.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR001646. 5peptide_repeat.
IPR020472. G-protein_beta_WD-40_rep.
IPR007111. NACHT_NTPase.
IPR027417. P-loop_NTPase.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00805. Pentapeptide. 1 hit.
PF00400. WD40. 15 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 15 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 2 hits.
SSF50998. SSF50998. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50837. NACHT. 1 hit.
PS00678. WD_REPEATS_1. 11 hits.
PS50082. WD_REPEATS_2. 15 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYY46_NOSS1
AccessioniPrimary (citable) accession number: Q8YRI1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2002
Last sequence update: March 1, 2002
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.