Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

ATP synthase subunit delta

Gene

atpH

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processATP synthesis, Hydrogen ion transport, Ion transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit delta
Alternative name(s):
ATP synthase F(1) sector subunit delta
F-type ATPase subunit delta
Short name:
F-ATPase subunit delta
Gene namesi
Name:atpH
Ordered Locus Names:BMEI0248
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000000419 Componenti: Chromosome I

Subcellular locationi

  • Cell inner membrane ; Peripheral membrane protein

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, CF(1), Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001846611 – 186ATP synthase subunit deltaAdd BLAST186

Interactioni

Subunit structurei

F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.

Protein-protein interaction databases

STRINGi224914.BAWG_2923.

Structurei

3D structure databases

ProteinModelPortaliQ8YJ38.
SMRiQ8YJ38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATPase delta chain family.

Phylogenomic databases

eggNOGiENOG4105E3N. Bacteria.
COG0712. LUCA.
HOGENOMiHOG000075825.
KOiK02113.
OMAiMVDNIQD.

Family and domain databases

Gene3Di1.10.520.20. 1 hit.
HAMAPiMF_01416. ATP_synth_delta_bact. 1 hit.
InterProiView protein in InterPro
IPR026015. ATP_synth_OSCP/delta_N_sf.
IPR020781. ATPase_OSCP/d_CS.
IPR000711. ATPase_OSCP/dsu.
PANTHERiPTHR11910. PTHR11910. 1 hit.
PfamiView protein in Pfam
PF00213. OSCP. 1 hit.
PRINTSiPR00125. ATPASEDELTA.
SUPFAMiSSF47928. SSF47928. 1 hit.
TIGRFAMsiTIGR01145. ATP_synt_delta. 1 hit.
PROSITEiView protein in PROSITE
PS00389. ATPASE_DELTA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8YJ38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETSSLISG VAQRCAGSLF ELALDANSVA SVEKDLGRFE ALLSGSEDLR
60 70 80 90 100
RLISSPVFSS EDQLHAIGAI ADKAGIKGLV GNFLRVVAQN RRLFALPGII
110 120 130 140 150
AAFRQIAAEH RGEISADVVS AHELTSAQQN ELKATLKGVA GKDVTINVTV
160 170 180
DPSILGGLIV KMGSRQIDTS LRTKLSSLKL ALKEVG
Length:186
Mass (Da):19,564
Last modified:March 1, 2002 - v1
Checksum:i225806A68B4245EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL51430.1.
PIRiAC3283.
RefSeqiWP_004684267.1. NZ_GG703781.1.

Genome annotation databases

EnsemblBacteriaiAAL51430; AAL51430; BMEI0248.
GeneIDi29593005.
KEGGibme:BMEI0248.
bmel:DK63_1184.
PATRICifig|224914.52.peg.1251.

Similar proteinsi

Entry informationi

Entry nameiATPD_BRUME
AccessioniPrimary (citable) accession number: Q8YJ38
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 1, 2002
Last modified: November 22, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families