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Q8YIG3 (RL25_BRUME) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L25
Alternative name(s):
General stress protein CTC
Gene names
Name:rplY
Synonyms:ctc
Ordered Locus Names:BMEI0481
OrganismBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) [Complete proteome] [HAMAP]
Taxonomic identifier224914 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance By similarity. HAMAP-Rule MF_01334

Subunit structure

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18 By similarity.

Sequence similarities

Belongs to the ribosomal protein L25P family. CTC subfamily.

Sequence caution

The sequence AAL51662.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_function5S rRNA binding

Inferred from electronic annotation. Source: InterPro

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 20720750S ribosomal protein L25 HAMAP-Rule MF_01334
PRO_0000181525

Sequences

Sequence LengthMass (Da)Tools
Q8YIG3 [UniParc].

Last modified June 21, 2005. Version 2.
Checksum: 24DD3507AD4C5492

FASTA20722,383
        10         20         30         40         50         60 
MSETYVLKAD LRTRVGKGSS RELRRNGQIP AVIYGDKQEP LAIAVSYKEI FYKIHGGGFK 

        70         80         90        100        110        120 
TTVATIEVDG KKIQVLPKDY QLDPVRDFPQ HVDFLRVSAK SVVHVNVPVH FKNEEAAPGI 

       130        140        150        160        170        180 
KRGGVLNVVR HDVELIVPAN AIPEALEIDL SGLEIGDSVH ISAVKLPKGA TPAIQDRDFT 

       190        200 
IATIAAPAGL KSEENAEGAA EEAKDGE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008917 Genomic DNA. Translation: AAL51662.1. Different initiation.
PIRAC3312.
RefSeqNP_539398.2. NC_003317.1.

3D structure databases

ProteinModelPortalQ8YIG3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224914.BMEI0481.

Proteomic databases

PRIDEQ8YIG3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL51662; AAL51662; BMEI0481.
GeneID1196192.
KEGGbme:BMEI0481.
PATRIC17851060. VBIBruMel92729_0540.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000214907.
KOK02897.
OMAKTPGIVY.
OrthoDBEOG6SZ1PC.
ProtClustDBPRK05618.

Family and domain databases

Gene3D2.170.120.20. 1 hit.
2.40.240.10. 1 hit.
HAMAPMF_01334. Ribosomal_L25_CTC.
InterProIPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR020057. Ribosomal_L25_b-dom.
IPR001021. Ribosomal_L25_long.
IPR020055. Ribosomal_L25_short.
[Graphical view]
PfamPF01386. Ribosomal_L25p. 1 hit.
PF14693. Ribosomal_TL5_C. 1 hit.
[Graphical view]
ProDomPD012503. Ribosomal_L25. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50715. SSF50715. 1 hit.
TIGRFAMsTIGR00731. ctc_TL5. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL25_BRUME
AccessionPrimary (citable) accession number: Q8YIG3
Entry history
Integrated into UniProtKB/Swiss-Prot: June 21, 2005
Last sequence update: June 21, 2005
Last modified: April 16, 2014
This is version 76 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella melitensis

Brucella melitensis (strain 16M): entries and gene names