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Q8YHP0 (RL3_BRUME) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L3
Gene names
Name:rplC
Ordered Locus Names:BMEI0757
OrganismBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) [Complete proteome] [HAMAP]
Taxonomic identifier224914 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP-Rule MF_01325

Subunit structure

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19 By similarity.

Post-translational modification

Methylated by PrmB By similarity. HAMAP-Rule MF_01325

Sequence similarities

Belongs to the ribosomal protein L3P family.

Sequence caution

The sequence AAL51938.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMMethylation
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 23723750S ribosomal protein L3 HAMAP-Rule MF_01325
PRO_0000077075

Amino acid modifications

Modified residue1511N5-methylglutamine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8YHP0 [UniParc].

Last modified February 16, 2004. Version 2.
Checksum: C89617EBC6E50AE5

FASTA23725,064
        10         20         30         40         50         60 
MRSGVIAQKL GMTRVYNDAG EHVPVTVLRM ENCHVVAQRT VEKNGYTAVQ LGVGMAKVKN 

        70         80         90        100        110        120 
TSKAMRGHFA KAEVEPKAKL AEFRVSPDNL LEVGVEITAE HFVAGQKVDV TGTSIGKGFA 

       130        140        150        160        170        180 
GVMKRHNFGG HRASHGNSIT HRSHGSTGQR QDPGKVFKGK KMAGHMGQTR VTTQNIEVVS 

       190        200        210        220        230 
TDSDRGLILV RGAVPGSKGA WILVRDAVKA SLPENAPKPA GLRAGAKAEA AATEGGE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008917 Genomic DNA. Translation: AAL51938.1. Different initiation.
PIRAG3346.
RefSeqNP_539674.2. NC_003317.1.

3D structure databases

ProteinModelPortalQ8YHP0.
SMRQ8YHP0. Positions 4-209.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224914.BMEI0757.

Proteomic databases

PRIDEQ8YHP0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL51938; AAL51938; BMEI0757.
GeneID1196468.
KEGGbme:BMEI0757.
PATRIC17851701. VBIBruMel92729_0854.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000100368.
KOK02906.
OMAKGMRMAG.
OrthoDBEOG6WDSMH.
ProtClustDBPRK00001.

Family and domain databases

HAMAPMF_01325_B. Ribosomal_L3_B.
InterProIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERPTHR11229. PTHR11229. 1 hit.
PfamPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMSSF50447. SSF50447. 1 hit.
TIGRFAMsTIGR03625. L3_bact. 1 hit.
PROSITEPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL3_BRUME
AccessionPrimary (citable) accession number: Q8YHP0
Entry history
Integrated into UniProtKB/Swiss-Prot: February 16, 2004
Last sequence update: February 16, 2004
Last modified: February 19, 2014
This is version 65 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella melitensis

Brucella melitensis (strain 16M): entries and gene names