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Q8YHP0

- RL3_BRUME

UniProt

Q8YHP0 - RL3_BRUME

Protein

50S ribosomal protein L3

Gene

rplC

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 2 (16 Feb 2004)
      Previous versions | rss
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    Functioni

    One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L3UniRule annotation
    Gene namesi
    Name:rplCUniRule annotation
    Ordered Locus Names:BMEI0757
    OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
    Taxonomic identifieri224914 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000000419: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 23723750S ribosomal protein L3PRO_0000077075Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei151 – 1511N5-methylglutamineUniRule annotation

    Post-translational modificationi

    Methylated by PrmB.UniRule annotation

    Keywords - PTMi

    Methylation

    Proteomic databases

    PRIDEiQ8YHP0.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

    Protein-protein interaction databases

    STRINGi224914.BMEI0757.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8YHP0.
    SMRiQ8YHP0. Positions 4-209.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L3P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000100368.
    KOiK02906.
    OMAiFMEDGKQ.
    OrthoDBiEOG6WDSMH.

    Family and domain databases

    HAMAPiMF_01325_B. Ribosomal_L3_B.
    InterProiIPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view]
    PANTHERiPTHR11229. PTHR11229. 1 hit.
    PfamiPF00297. Ribosomal_L3. 1 hit.
    [Graphical view]
    SUPFAMiSSF50447. SSF50447. 1 hit.
    TIGRFAMsiTIGR03625. L3_bact. 1 hit.
    PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q8YHP0-1 [UniParc]FASTAAdd to Basket

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    MRSGVIAQKL GMTRVYNDAG EHVPVTVLRM ENCHVVAQRT VEKNGYTAVQ    50
    LGVGMAKVKN TSKAMRGHFA KAEVEPKAKL AEFRVSPDNL LEVGVEITAE 100
    HFVAGQKVDV TGTSIGKGFA GVMKRHNFGG HRASHGNSIT HRSHGSTGQR 150
    QDPGKVFKGK KMAGHMGQTR VTTQNIEVVS TDSDRGLILV RGAVPGSKGA 200
    WILVRDAVKA SLPENAPKPA GLRAGAKAEA AATEGGE 237
    Length:237
    Mass (Da):25,064
    Last modified:February 16, 2004 - v2
    Checksum:iC89617EBC6E50AE5
    GO

    Sequence cautioni

    The sequence AAL51938.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL51938.1. Different initiation.
    PIRiAG3346.
    RefSeqiNP_539674.2. NC_003317.1.

    Genome annotation databases

    EnsemblBacteriaiAAL51938; AAL51938; BMEI0757.
    GeneIDi1196468.
    KEGGibme:BMEI0757.
    PATRICi17851701. VBIBruMel92729_0854.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL51938.1 . Different initiation.
    PIRi AG3346.
    RefSeqi NP_539674.2. NC_003317.1.

    3D structure databases

    ProteinModelPortali Q8YHP0.
    SMRi Q8YHP0. Positions 4-209.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224914.BMEI0757.

    Proteomic databases

    PRIDEi Q8YHP0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL51938 ; AAL51938 ; BMEI0757 .
    GeneIDi 1196468.
    KEGGi bme:BMEI0757.
    PATRICi 17851701. VBIBruMel92729_0854.

    Phylogenomic databases

    HOGENOMi HOG000100368.
    KOi K02906.
    OMAi FMEDGKQ.
    OrthoDBi EOG6WDSMH.

    Family and domain databases

    HAMAPi MF_01325_B. Ribosomal_L3_B.
    InterProi IPR000597. Ribosomal_L3.
    IPR019927. Ribosomal_L3_bac/org-type.
    IPR019926. Ribosomal_L3_CS.
    IPR009000. Transl_B-barrel.
    [Graphical view ]
    PANTHERi PTHR11229. PTHR11229. 1 hit.
    Pfami PF00297. Ribosomal_L3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50447. SSF50447. 1 hit.
    TIGRFAMsi TIGR03625. L3_bact. 1 hit.
    PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 16M / ATCC 23456 / NCTC 10094.

    Entry informationi

    Entry nameiRL3_BRUME
    AccessioniPrimary (citable) accession number: Q8YHP0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 16, 2004
    Last sequence update: February 16, 2004
    Last modified: October 1, 2014
    This is version 67 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Brucella melitensis
      Brucella melitensis (strain 16M): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3