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Protein

50S ribosomal protein L23

Gene

rplW

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23UniRule annotation
Gene namesi
Name:rplWUniRule annotation
Ordered Locus Names:BMEI0759
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000000419 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002727171 – 9750S ribosomal protein L23Add BLAST97

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.UniRule annotation

Protein-protein interaction databases

STRINGi224914.BAWG_2731.

Structurei

3D structure databases

ProteinModelPortaliQ8YHN8.
SMRiQ8YHN8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41080KG. Bacteria.
COG0089. LUCA.
HOGENOMiHOG000231364.
KOiK02892.
OMAiTMNPPRR.

Family and domain databases

HAMAPiMF_01369_B. Ribosomal_L23_B. 1 hit.
InterProiView protein in InterPro
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
PfamiView protein in Pfam
PF00276. Ribosomal_L23. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8YHN8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLRHYDVI VSPVITEKST MVSEHNQVVF NVARKATKPE IKAAVEALFG
60 70 80 90
VKVTAVNTAV CKGKVKRFRG LVGRQSDVKK AIVTLAEGQS IDVSTGL
Length:97
Mass (Da):10,482
Last modified:March 1, 2002 - v1
Checksum:iA485EE389D189E13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA. Translation: AAL51940.1.
PIRiAI3346.
RefSeqiWP_004683926.1. NZ_GG703780.1.

Genome annotation databases

EnsemblBacteriaiAAL51940; AAL51940; BMEI0759.
GeneIDi29593564.
KEGGibme:BMEI0759.
bmel:DK63_663.
PATRICifig|224914.52.peg.694.

Similar proteinsi

Entry informationi

Entry nameiRL23_BRUME
AccessioniPrimary (citable) accession number: Q8YHN8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: March 1, 2002
Last modified: June 7, 2017
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families