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Q8YHM4

- RL18_BRUME

UniProt

Q8YHM4 - RL18_BRUME

Protein

50S ribosomal protein L18

Gene

rplR

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L18UniRule annotation
    Gene namesi
    Name:rplRUniRule annotation
    Ordered Locus Names:BMEI0773
    OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
    Taxonomic identifieri224914 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000000419: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12012050S ribosomal protein L18PRO_0000131229Add
    BLAST

    Proteomic databases

    PRIDEiQ8YHM4.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.UniRule annotation

    Protein-protein interaction databases

    STRINGi224914.BMEI0773.

    Structurei

    3D structure databases

    ProteinModelPortaliQ8YHM4.
    SMRiQ8YHM4. Positions 26-120.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L18P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000248742.
    KOiK02881.
    OMAiRTNCHIY.
    OrthoDBiEOG64NB48.

    Family and domain databases

    HAMAPiMF_01337_B. Ribosomal_L18_B.
    InterProiIPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view]
    PfamiPF00861. Ribosomal_L18p. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00060. L18_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q8YHM4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASPKETLQR RAARVRRQVK AVANGRPRLS VHRSSKNIYA QIIDDVRGVT    50
    LAAASTLDGD LKGKLKTGAD SAAAAAVGKL VAERAVKAGV KDVVFDRGAF 100
    IYHGRVKALA EAAREGGLSF 120
    Length:120
    Mass (Da):12,669
    Last modified:March 1, 2002 - v1
    Checksum:i665D1B7693B029E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL51954.1.
    PIRiAG3348.
    RefSeqiNP_539690.1. NC_003317.1.

    Genome annotation databases

    EnsemblBacteriaiAAL51954; AAL51954; BMEI0773.
    GeneIDi1196484.
    KEGGibme:BMEI0773.
    PATRICi17801704. VBIBruMel146950_3172.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE008917 Genomic DNA. Translation: AAL51954.1 .
    PIRi AG3348.
    RefSeqi NP_539690.1. NC_003317.1.

    3D structure databases

    ProteinModelPortali Q8YHM4.
    SMRi Q8YHM4. Positions 26-120.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 224914.BMEI0773.

    Proteomic databases

    PRIDEi Q8YHM4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL51954 ; AAL51954 ; BMEI0773 .
    GeneIDi 1196484.
    KEGGi bme:BMEI0773.
    PATRICi 17801704. VBIBruMel146950_3172.

    Phylogenomic databases

    HOGENOMi HOG000248742.
    KOi K02881.
    OMAi RTNCHIY.
    OrthoDBi EOG64NB48.

    Family and domain databases

    HAMAPi MF_01337_B. Ribosomal_L18_B.
    InterProi IPR005484. Ribosomal_L18/L5.
    IPR004389. Ribosomal_L18_bac-type.
    [Graphical view ]
    Pfami PF00861. Ribosomal_L18p. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00060. L18_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 16M / ATCC 23456 / NCTC 10094.

    Entry informationi

    Entry nameiRL18_BRUME
    AccessioniPrimary (citable) accession number: Q8YHM4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 16, 2005
    Last sequence update: March 1, 2002
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Brucella melitensis
      Brucella melitensis (strain 16M): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3