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Q8YEB4 (RBFA_BRUME) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosome-binding factor A
Gene names
Name:rbfA
Ordered Locus Names:BMEI1964
OrganismBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) [Complete proteome] [HAMAP]
Taxonomic identifier224914 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length150 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity. HAMAP-Rule MF_00003

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00003.

Sequence similarities

Belongs to the RbfA family.

Sequence caution

The sequence AAL53145.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processrRNA processing

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 150150Ribosome-binding factor A HAMAP-Rule MF_00003
PRO_0000102632

Sequences

Sequence LengthMass (Da)Tools
Q8YEB4 [UniParc].

Last modified May 15, 2002. Version 2.
Checksum: 0BC5A220A3DD4F0D

FASTA15016,633
        10         20         30         40         50         60 
MARSHDTKGS GGLSQRQLRV GEQVRHALAQ VLQRGEIRDD LIERTVISVS EVRMSPDLKI 

        70         80         90        100        110        120 
ATCFITPLGS ADPQAVIKAL ASHAKFIRGR VAPSLAQMKY MPEFRFRPDT SFDNFSKIDA 

       130        140        150 
LLRFPEVARD LSHDDDEDGG ADEAPRNGDE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE008917 Genomic DNA. Translation: AAL53145.1. Different initiation.
PIRAF3497.
RefSeqNP_540881.1. NC_003317.1.

3D structure databases

ProteinModelPortalQ8YEB4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224914.BMEI1964.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL53145; AAL53145; BMEI1964.
GeneID1197675.
KEGGbme:BMEI1964.
PATRIC17854369. VBIBruMel92729_2168.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000218324.
KOK02834.
OMAVARDLHH.
OrthoDBEOG6XQ3TJ.

Enzyme and pathway databases

BioCycBMEL224914:GCJ0-2011-MONOMER.

Family and domain databases

Gene3D3.30.300.20. 1 hit.
HAMAPMF_00003. RbfA.
InterProIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view]
PfamPF02033. RBFA. 1 hit.
[Graphical view]
ProDomPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF89919. SSF89919. 1 hit.
TIGRFAMsTIGR00082. rbfA. 1 hit.
PROSITEPS01319. RBFA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRBFA_BRUME
AccessionPrimary (citable) accession number: Q8YEB4
Entry history
Integrated into UniProtKB/Swiss-Prot: May 15, 2002
Last sequence update: May 15, 2002
Last modified: May 14, 2014
This is version 70 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Brucella melitensis

Brucella melitensis (strain 16M): entries and gene names