Q8YEB4 (RBFA_BRUME) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribosome-binding factor A

Gene names

Name:	rbfA
Ordered Locus Names:	BMEI1964

Organism

Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) [Complete proteome] [HAMAP]

Taxonomic identifier

224914 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella › Brucella melitensis › Brucella melitensis bv. 1

Protein attributes

Sequence length	150 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity. HAMAP-Rule MF_00003
Subcellular location	Cytoplasm Potential HAMAP-Rule MF_00003.
Sequence similarities	Belongs to the RbfA family.
Sequence caution	The sequence AAL53145.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	rRNA processing
Cellular component	Cytoplasm
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	rRNA processing Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 150	150	Ribosome-binding factor A HAMAP-Rule MF_00003		PRO_0000102632

Sequences

	Sequence		Length	Mass (Da)
	Q8YEB4 [UniParc]. Last modified May 15, 2002. Version 2. Checksum: 0BC5A220A3DD4F0D	FASTA	150	16,633
	10 20 30 40 50 60 MARSHDTKGS GGLSQRQLRV GEQVRHALAQ VLQRGEIRDD LIERTVISVS EVRMSPDLKI 70 80 90 100 110 120 ATCFITPLGS ADPQAVIKAL ASHAKFIRGR VAPSLAQMKY MPEFRFRPDT SFDNFSKIDA 130 140 150 LLRFPEVARD LSHDDDEDGG ADEAPRNGDE

References

[1]

"The genome sequence of the facultative intracellular pathogen Brucella melitensis." DelVecchio V.G., Kapatral V., Redkar R.J., Patra G., Mujer C., Los T., Ivanova N., Anderson I., Bhattacharyya A., Lykidis A., Reznik G., Jablonski L., Larsen N., D'Souza M., Bernal A., Mazur M., Goltsman E., Selkov E. , Elzer P.H., Hagius S., O'Callaghan D., Letesson J.-J., Haselkorn R., Kyrpides N.C., Overbeek R. Proc. Natl. Acad. Sci. U.S.A. 99:443-448(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 16M / ATCC 23456 / NCTC 10094.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE008917 Genomic DNA. Translation: AAL53145.1. Different initiation.
PIR	AF3497.
RefSeq	NP_540881.1. NC_003317.1.
3D structure databases
ProteinModelPortal	Q8YEB4.
ModBase	Search...
Protein-protein interaction databases
STRING	224914.BMEI1964.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAL53145; AAL53145; BMEI1964.
GeneID	1197675.
KEGG	bme:BMEI1964.
PATRIC	17854369. VBIBruMel92729_2168.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000218324.
KO	K02834.
OMA	LRQMKYM.
ProtClustDB	PRK00521.
Family and domain databases
Gene3D	3.30.300.20. 1 hit.
HAMAP	MF_00003. RbfA.
InterPro	IPR015946. KH_dom-like_a/b. IPR000238. Ribosome-bd_facA. IPR023799. Ribosome-bd_facA_dom. IPR020053. Ribosome-bd_factorA_CS. [Graphical view]
Pfam	PF02033. RBFA. 1 hit. [Graphical view]
ProDom	PD007327. Rib_bd_factA. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF89919. Rib_bd_factA. 1 hit.
TIGRFAMs	TIGR00082. rbfA. 1 hit.
PROSITE	PS01319. RBFA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RBFA_BRUME

Accession

Primary (citable) accession number: Q8YEB4

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 15, 2002
Last sequence update:	May 15, 2002
Last modified:	May 1, 2013
This is version 65 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program