ID   NIKD_BRUME              Reviewed;         262 AA.
AC   Q8YCN8;
DT   01-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2002, sequence version 1.
DT   27-MAR-2024, entry version 115.
DE   RecName: Full=Nickel import ATP-binding protein NikD {ECO:0000255|HAMAP-Rule:MF_01711};
DE            EC=7.2.2.11 {ECO:0000255|HAMAP-Rule:MF_01711};
GN   Name=nikD {ECO:0000255|HAMAP-Rule:MF_01711};
GN   OrderedLocusNames=BMEII0490;
OS   Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Brucellaceae; Brucella/Ochrobactrum group; Brucella.
OX   NCBI_TaxID=224914;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=16M / ATCC 23456 / NCTC 10094;
RX   PubMed=11756688; DOI=10.1073/pnas.221575398;
RA   DelVecchio V.G., Kapatral V., Redkar R.J., Patra G., Mujer C., Los T.,
RA   Ivanova N., Anderson I., Bhattacharyya A., Lykidis A., Reznik G.,
RA   Jablonski L., Larsen N., D'Souza M., Bernal A., Mazur M., Goltsman E.,
RA   Selkov E., Elzer P.H., Hagius S., O'Callaghan D., Letesson J.-J.,
RA   Haselkorn R., Kyrpides N.C., Overbeek R.;
RT   "The genome sequence of the facultative intracellular pathogen Brucella
RT   melitensis.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:443-448(2002).
CC   -!- FUNCTION: Part of the ABC transporter complex NikABCDE involved in
CC       nickel import. Responsible for energy coupling to the transport system.
CC       {ECO:0000255|HAMAP-Rule:MF_01711}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + H2O + Ni(2+)(out) = ADP + H(+) + Ni(2+)(in) + phosphate;
CC         Xref=Rhea:RHEA:15557, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:49786,
CC         ChEBI:CHEBI:456216; EC=7.2.2.11; Evidence={ECO:0000255|HAMAP-
CC         Rule:MF_01711};
CC   -!- SUBUNIT: The complex is composed of two ATP-binding proteins (NikD and
CC       NikE), two transmembrane proteins (NikB and NikC) and a solute-binding
CC       protein (NikA). {ECO:0000255|HAMAP-Rule:MF_01711}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000255|HAMAP-
CC       Rule:MF_01711}; Peripheral membrane protein {ECO:0000255|HAMAP-
CC       Rule:MF_01711}.
CC   -!- SIMILARITY: Belongs to the ABC transporter superfamily. Nickel importer
CC       (TC 3.A.1.5.3) family. {ECO:0000255|HAMAP-Rule:MF_01711}.
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DR   EMBL; AE008918; AAL53732.1; -; Genomic_DNA.
DR   PIR; AI3570; AI3570.
DR   RefSeq; WP_002965841.1; NZ_GG703779.1.
DR   AlphaFoldDB; Q8YCN8; -.
DR   SMR; Q8YCN8; -.
DR   GeneID; 3827146; -.
DR   KEGG; bme:BMEII0490; -.
DR   KEGG; bmel:DK63_2752; -.
DR   PATRIC; fig|224914.52.peg.2882; -.
DR   eggNOG; COG0444; Bacteria.
DR   PhylomeDB; Q8YCN8; -.
DR   Proteomes; UP000000419; Chromosome II.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015413; F:ABC-type nickel transporter activity; IEA:UniProtKB-EC.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0016151; F:nickel cation binding; IEA:InterPro.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR   InterPro; IPR017871; ABC_transporter-like_CS.
DR   InterPro; IPR014138; Nickel_NikD.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   NCBIfam; TIGR02770; nickel_nikD; 1.
DR   PANTHER; PTHR43297; OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD; 1.
DR   PANTHER; PTHR43297:SF2; OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD; 1.
DR   Pfam; PF00005; ABC_tran; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR   PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
DR   PROSITE; PS51247; NIKD; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Cell inner membrane; Cell membrane; Ion transport; Membrane;
KW   Nickel; Nickel transport; Nucleotide-binding; Translocase; Transport.
FT   CHAIN           1..262
FT                   /note="Nickel import ATP-binding protein NikD"
FT                   /id="PRO_0000092618"
FT   DOMAIN          6..249
FT                   /note="ABC transporter"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01711"
FT   BINDING         42..49
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01711"
SQ   SEQUENCE   262 AA;  28251 MW;  773F874C645C344B CRC64;
     MTRKTLAIEG LTATTVIDGQ QRVLVDNLSL GVQRGRILAL VGASGSGKSM TCSAALGVLP
     PGVTASRGRV TIDGVPYAAN ALRGRHVATI MQNPRSAFNP VRTMRDHAIE TLQALGKLSS
     NPQDQIVHCM RAAGLEDVKT ILSLHPFEMS GGMLQRMMIA LALLSEAPFL FADEPTTDLD
     LVVQLRVLEL LEKLVEERDL GILLVTHDMG VVARLAHDVA VLDHGRLIEQ APVMDIFQTP
     GHEVTRMLVS AHLSLYGMEL NA
//