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Protein

Protein FdhD homolog

Gene

fdhD

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Necessary for formate dehydrogenase activity.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FdhD homologUniRule annotation
Gene namesi
Name:fdhDUniRule annotation
Ordered Locus Names:BMEII0588
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000419 Componenti: Chromosome II

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 269269Protein FdhD homologPRO_0000152894Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi224914.BAWG_1984.

Structurei

3D structure databases

ProteinModelPortaliQ8YCE3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FdhD family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000079468.
KOiK02379.
OMAiPFTQTFS.
OrthoDBiEOG6DG2R8.

Family and domain databases

HAMAPiMF_00187. FdhD.
InterProiIPR016193. Cytidine_deaminase-like.
IPR003786. FdhD.
[Graphical view]
PfamiPF02634. FdhD-NarQ. 1 hit.
[Graphical view]
PIRSFiPIRSF015626. FdhD. 1 hit.
SUPFAMiSSF53927. SSF53927. 1 hit.
TIGRFAMsiTIGR00129. fdhD_narQ. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8YCE3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNQKISRDV HHLAHRMSGF QESSRIVPEE APIAMSYNGT TQAVMMATPG
60 70 80 90 100
DLEDFAIGFS LTENIVTRIE EIEALDIVAF ESGIDIQMKL AKQPEQRLSA
110 120 130 140 150
RRRFMAGQVG CGLCGIDSIE QALRPLHPLE ECSTTFTTRD IAAAVASLGA
160 170 180 190 200
AQALNAKTHA THGAGFFRPG EGLFAVREDI GRHNALDKLI GAVAREGLLA
210 220 230 240 250
EEGIVAITSR VSVEMVQKAV MLGVPVLAAI SAPTALAIRT AEAANLTLVA
260
LVRDEEFDIY THCGRIIEG
Length:269
Mass (Da):28,876
Last modified:March 1, 2002 - v1
Checksum:i33117EBD4F459A99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008918 Genomic DNA. Translation: AAL53830.1.
PIRiAC3583.
RefSeqiWP_004681982.1. NZ_GG703779.1.

Genome annotation databases

EnsemblBacteriaiAAL53830; AAL53830; BMEII0588.
KEGGibme:BMEII0588.
PATRICi17799924. VBIBruMel146950_2296.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008918 Genomic DNA. Translation: AAL53830.1.
PIRiAC3583.
RefSeqiWP_004681982.1. NZ_GG703779.1.

3D structure databases

ProteinModelPortaliQ8YCE3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224914.BAWG_1984.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL53830; AAL53830; BMEII0588.
KEGGibme:BMEII0588.
PATRICi17799924. VBIBruMel146950_2296.

Phylogenomic databases

HOGENOMiHOG000079468.
KOiK02379.
OMAiPFTQTFS.
OrthoDBiEOG6DG2R8.

Family and domain databases

HAMAPiMF_00187. FdhD.
InterProiIPR016193. Cytidine_deaminase-like.
IPR003786. FdhD.
[Graphical view]
PfamiPF02634. FdhD-NarQ. 1 hit.
[Graphical view]
PIRSFiPIRSF015626. FdhD. 1 hit.
SUPFAMiSSF53927. SSF53927. 1 hit.
TIGRFAMsiTIGR00129. fdhD_narQ. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 16M / ATCC 23456 / NCTC 10094.

Entry informationi

Entry nameiFDHD_BRUME
AccessioniPrimary (citable) accession number: Q8YCE3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: March 1, 2002
Last modified: July 22, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.