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Protein

sn-glycerol-3-phosphate import ATP-binding protein UgpC

Gene

ugpC

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system.UniRule annotation

Catalytic activityi

ATP + H2O + glycerol-3-phosphate(Out) = ADP + phosphate + glycerol-3-phosphate(In).UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi37 – 448ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Sugar transport, Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
sn-glycerol-3-phosphate import ATP-binding protein UgpCUniRule annotation (EC:3.6.3.20UniRule annotation)
Gene namesi
Name:ugpCUniRule annotation
Ordered Locus Names:BMEII0621
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000419 Componenti: Chromosome II

Subcellular locationi

  • Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 351351sn-glycerol-3-phosphate import ATP-binding protein UgpCPRO_0000289736Add
BLAST

Interactioni

Subunit structurei

The complex is composed of two ATP-binding proteins (UgpC), two transmembrane proteins (UgpA and UgpE) and a solute-binding protein (UgpB).UniRule annotation

Protein-protein interaction databases

STRINGi224914.BAWG_1955.

Structurei

3D structure databases

ProteinModelPortaliQ8YCB1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 235232ABC transporterUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily. sn-glycerol-3-phosphate importer (TC 3.A.1.1.3) family. [View classification]UniRule annotation
Contains 1 ABC transporter domain.UniRule annotation

Phylogenomic databases

KOiK05816.
OMAiVNARDFH.
OrthoDBiEOG6T7N3V.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
IPR017922. UgpC.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS51315. UGPC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8YCB1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKIVLDNVR KSYGGNIEVI KGVSLEIADG EFVVLVGPSG CGKSTLLRMI
60 70 80 90 100
AGLESITSGT ISIGERVVNN VEPAERDIAM VFQNYALYPH MTVRENLAYG
110 120 130 140 150
LKNRKTPKEE IERRIAKAAK VLEIEQFLER KPRQLSGGQR QRVAMGRAIV
160 170 180 190 200
REPAAFLFDE PLSNLDAKLR VQMRVEIKRL QRSLGTTSVY VTHDQMEAMT
210 220 230 240 250
MADRLVVLNA GHIEQVGTPI ELYEKPASIF VATFIGSPSM NLLQSPESAA
260 270 280 290 300
WQPGRAITLP SGGYTFGVRP EDIRILEEGD QDADGFNAQV RIEAVELVGA
310 320 330 340 350
ESYIHAALSD GKPLIFRVAG RSTHNIDEMV RVGASATDVH IFGADGRRVS

D
Length:351
Mass (Da):38,531
Last modified:March 1, 2002 - v1
Checksum:i37A582BE843EBBE1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008918 Genomic DNA. Translation: AAL53863.1.
PIRiAD3587.
RefSeqiNP_541599.1. NC_003318.1.
WP_004681937.1. NZ_GG703779.1.

Genome annotation databases

EnsemblBacteriaiAAL53863; AAL53863; BMEII0621.
KEGGibme:BMEII0621.
PATRICi17799854. VBIBruMel146950_2261.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008918 Genomic DNA. Translation: AAL53863.1.
PIRiAD3587.
RefSeqiNP_541599.1. NC_003318.1.
WP_004681937.1. NZ_GG703779.1.

3D structure databases

ProteinModelPortaliQ8YCB1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224914.BAWG_1955.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL53863; AAL53863; BMEII0621.
KEGGibme:BMEII0621.
PATRICi17799854. VBIBruMel146950_2261.

Phylogenomic databases

KOiK05816.
OMAiVNARDFH.
OrthoDBiEOG6T7N3V.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR008995. Mo/tungstate-bd_C_term_dom.
IPR012340. NA-bd_OB-fold.
IPR027417. P-loop_NTPase.
IPR013611. Transp-assoc_OB_typ2.
IPR017922. UgpC.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
PF08402. TOBE_2. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF50331. SSF50331. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
PS51315. UGPC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 16M / ATCC 23456 / NCTC 10094.

Entry informationi

Entry nameiUGPC_BRUME
AccessioniPrimary (citable) accession number: Q8YCB1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 1, 2002
Last modified: June 24, 2015
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.