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Q8Y6I1 (Y1703_LISMO) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized RNA methyltransferase lmo1703

EC=2.1.1.-
Gene names
Ordered Locus Names:lmo1703
OrganismListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) [Reference proteome] [HAMAP]
Taxonomic identifier169963 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 459459Uncharacterized RNA methyltransferase lmo1703
PRO_0000162001

Regions

Domain5 – 6359TRAM

Sites

Active site4151Nucleophile By similarity
Metal binding761Iron-sulfur (4Fe-4S) By similarity
Metal binding821Iron-sulfur (4Fe-4S) By similarity
Metal binding851Iron-sulfur (4Fe-4S) By similarity
Metal binding1661Iron-sulfur (4Fe-4S) By similarity
Binding site2901S-adenosyl-L-methionine By similarity
Binding site3191S-adenosyl-L-methionine; via carbonyl oxygen By similarity
Binding site3401S-adenosyl-L-methionine By similarity
Binding site3881S-adenosyl-L-methionine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8Y6I1 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: A582F57A42595F06

FASTA45951,325
        10         20         30         40         50         60 
MNQNPVEEGQ KFPLTIRRMG INGEGIGYFK KAVVFVPGAI TGEEVVVEAV KVRDRFTEAK 

        70         80         90        100        110        120 
LNKIRKKSPN RVTAPCPVYE ACGGCQLQHV AYSAQLELKR DIVIQSIEKH TKIDPTKLKI 

       130        140        150        160        170        180 
RPTIGMEDPW RYRNKSQFQT RMVGSGQVET GLFGANSHQL VPIEDCIVQQ PVTIKVTNFV 

       190        200        210        220        230        240 
RDLLEKYGVP IYDEKAGSGI VRTIVVRTGV KTGETQLVFI TNSKKLPKKR EMLAEIEAAL 

       250        260        270        280        290        300 
PEVTSIMQNV NQAKSSLIFG DETFLLAGKE SIEEKLMELE FDLSARAFFQ LNPFQTERLY 

       310        320        330        340        350        360 
QEVEKALVLT GSETLVDAYC GVGTIGQAFA GKVKEVRGMD IIPESIEDAK RNAEKNGIEN 

       370        380        390        400        410        420 
VYYEVGKAED VLPKWVKEGF RPDAVIVDPP RSGCDQGLIK SLLDVEAKQL VYVSCNPSTL 

       430        440        450 
ARDLALLAKK YRIRYMQPVD MFPQTAHVET VVLLQLKDK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL591981 Genomic DNA. Translation: CAC99781.1.
PIRAG1287.
RefSeqNP_465228.1. NC_003210.1.

3D structure databases

ProteinModelPortalQ8Y6I1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING169963.lmo1703.

Protocols and materials databases

DNASU985603.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAC99781; CAC99781; CAC99781.
GeneID985603.
KEGGlmo:lmo1703.
PATRIC20312587. VBILisMon69206_1746.

Organism-specific databases

GenoListLMO1703.

Phylogenomic databases

eggNOGCOG2265.
HOGENOMHOG000029867.
KOK00599.
OMAYISCNAS.
OrthoDBEOG6V4GKM.
PhylomeDBQ8Y6I1.

Enzyme and pathway databases

BioCycLMON169963:LMO1703-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProIPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view]
PfamPF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsTIGR00479. rumA. 1 hit.
PROSITEPS51687. SAM_MT_RNA_M5U. 1 hit.
PS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1703_LISMO
AccessionPrimary (citable) accession number: Q8Y6I1
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: March 1, 2002
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families