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Q8Y6I1

- Y1703_LISMO

UniProt

Q8Y6I1 - Y1703_LISMO

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Protein
Uncharacterized RNA methyltransferase lmo1703
Gene
lmo1703
Organism
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi76 – 761Iron-sulfur (4Fe-4S) By similarity
Metal bindingi82 – 821Iron-sulfur (4Fe-4S) By similarity
Metal bindingi85 – 851Iron-sulfur (4Fe-4S) By similarity
Metal bindingi166 – 1661Iron-sulfur (4Fe-4S) By similarity
Binding sitei290 – 2901S-adenosyl-L-methionine By similarity
Binding sitei319 – 3191S-adenosyl-L-methionine; via carbonyl oxygen By similarity
Binding sitei340 – 3401S-adenosyl-L-methionine By similarity
Binding sitei388 – 3881S-adenosyl-L-methionine By similarity
Active sitei415 – 4151Nucleophile By similarity

GO - Molecular functioni

  1. 4 iron, 4 sulfur cluster binding Source: UniProtKB-KW
  2. RNA binding Source: InterPro
  3. RNA methyltransferase activity Source: InterPro
  4. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. RNA processing Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

4Fe-4S, Iron, Iron-sulfur, Metal-binding, S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciLMON169963:LMO1703-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized RNA methyltransferase lmo1703 (EC:2.1.1.-)
Gene namesi
Ordered Locus Names:lmo1703
OrganismiListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Taxonomic identifieri169963 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000000817: Chromosome

Organism-specific databases

GenoListiLMO1703.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 459459Uncharacterized RNA methyltransferase lmo1703
PRO_0000162001Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi169963.lmo1703.

Structurei

3D structure databases

ProteinModelPortaliQ8Y6I1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 6359TRAM
Add
BLAST

Sequence similaritiesi

Contains 1 TRAM domain.

Phylogenomic databases

eggNOGiCOG2265.
HOGENOMiHOG000029867.
KOiK00599.
OMAiYISCNAS.
OrthoDBiEOG6V4GKM.
PhylomeDBiQ8Y6I1.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view]
PfamiPF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00479. rumA. 1 hit.
PROSITEiPS51687. SAM_MT_RNA_M5U. 1 hit.
PS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8Y6I1-1 [UniParc]FASTAAdd to Basket

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MNQNPVEEGQ KFPLTIRRMG INGEGIGYFK KAVVFVPGAI TGEEVVVEAV    50
KVRDRFTEAK LNKIRKKSPN RVTAPCPVYE ACGGCQLQHV AYSAQLELKR 100
DIVIQSIEKH TKIDPTKLKI RPTIGMEDPW RYRNKSQFQT RMVGSGQVET 150
GLFGANSHQL VPIEDCIVQQ PVTIKVTNFV RDLLEKYGVP IYDEKAGSGI 200
VRTIVVRTGV KTGETQLVFI TNSKKLPKKR EMLAEIEAAL PEVTSIMQNV 250
NQAKSSLIFG DETFLLAGKE SIEEKLMELE FDLSARAFFQ LNPFQTERLY 300
QEVEKALVLT GSETLVDAYC GVGTIGQAFA GKVKEVRGMD IIPESIEDAK 350
RNAEKNGIEN VYYEVGKAED VLPKWVKEGF RPDAVIVDPP RSGCDQGLIK 400
SLLDVEAKQL VYVSCNPSTL ARDLALLAKK YRIRYMQPVD MFPQTAHVET 450
VVLLQLKDK 459
Length:459
Mass (Da):51,325
Last modified:March 1, 2002 - v1
Checksum:iA582F57A42595F06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591981 Genomic DNA. Translation: CAC99781.1.
PIRiAG1287.
RefSeqiNP_465228.1. NC_003210.1.

Genome annotation databases

EnsemblBacteriaiCAC99781; CAC99781; CAC99781.
GeneIDi985603.
KEGGilmo:lmo1703.
PATRICi20312587. VBILisMon69206_1746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591981 Genomic DNA. Translation: CAC99781.1 .
PIRi AG1287.
RefSeqi NP_465228.1. NC_003210.1.

3D structure databases

ProteinModelPortali Q8Y6I1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 169963.lmo1703.

Protocols and materials databases

DNASUi 985603.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC99781 ; CAC99781 ; CAC99781 .
GeneIDi 985603.
KEGGi lmo:lmo1703.
PATRICi 20312587. VBILisMon69206_1746.

Organism-specific databases

GenoListi LMO1703.

Phylogenomic databases

eggNOGi COG2265.
HOGENOMi HOG000029867.
KOi K00599.
OMAi YISCNAS.
OrthoDBi EOG6V4GKM.
PhylomeDBi Q8Y6I1.

Enzyme and pathway databases

BioCyci LMON169963:LMO1703-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProi IPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view ]
Pfami PF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsi TIGR00479. rumA. 1 hit.
PROSITEi PS51687. SAM_MT_RNA_M5U. 1 hit.
PS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-679 / EGD-e.

Entry informationi

Entry nameiY1703_LISMO
AccessioniPrimary (citable) accession number: Q8Y6I1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: March 1, 2002
Last modified: July 9, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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