Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Lmo2059 protein

Gene

lmo2059

Organism
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

TCDBi1.A.1.17.2. the voltage-gated ion channel (vic) superfamily.

Names & Taxonomyi

Protein namesi
Submitted name:
Lmo2059 proteinImported
Gene namesi
Ordered Locus Names:lmo2059Imported
OrganismiListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)Imported
Taxonomic identifieri169963 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000000817 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 27HelicalSequence analysisAdd BLAST19
Transmembranei33 – 52HelicalSequence analysisAdd BLAST20
Transmembranei72 – 95HelicalSequence analysisAdd BLAST24
Transmembranei115 – 132HelicalSequence analysisAdd BLAST18
Transmembranei144 – 162HelicalSequence analysisAdd BLAST19
Transmembranei168 – 192HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ8Y5K1.

Interactioni

Protein-protein interaction databases

DIPiDIP-60327N.
STRINGi169963.lmo2059.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H33X-ray3.10A98-233[»]
4H37X-ray3.35A/B98-233[»]
ProteinModelPortaliQ8Y5K1.
SMRiQ8Y5K1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini120 – 193Ion_trans_2InterPro annotationAdd BLAST74

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG41082JI. Bacteria.
COG1226. LUCA.
HOGENOMiHOG000050901.
KOiK10716.
OMAiHISNRIN.
PhylomeDBiQ8Y5K1.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR027359. Channel_four-helix_dom.
IPR013099. K_chnl_dom.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF07885. Ion_trans_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8Y5K1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKTKRKMIY ETFMLILILL SLALLPYRNN FTFILNWIIW VIFTLDYLVR
60 70 80 90 100
LYRADNKWHY VKTHPFQLIA IIPFYGGFRA ARIVSFVHLL SITAMGRRYI
110 120 130 140 150
VPIYSFFRSN GLNRFLMIFV LLVIIIPVPM VFIEPEINNY PDALWWAIVT
160 170 180 190 200
ATTVGYGDIV PVTPIGRILA SIMMLFGIAF IGMITSTITN FFRAKKPTNS
210 220 230 240
STQRANKITQ LISETPDLTK EEIAVVEQFL TLRKKELADE NTKSDSE
Length:247
Mass (Da):28,602
Last modified:March 1, 2002 - v1
Checksum:i92F73DA5019B3E48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591982 Genomic DNA. Translation: CAD00137.1.
PIRiAC1332.
RefSeqiNP_465583.1. NC_003210.1.
WP_003734055.1. NC_003210.1.

Genome annotation databases

EnsemblBacteriaiCAD00137; CAD00137; CAD00137.
GeneIDi988010.
KEGGilmo:lmo2059.
PATRICi20313318. VBILisMon69206_2107.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591982 Genomic DNA. Translation: CAD00137.1.
PIRiAC1332.
RefSeqiNP_465583.1. NC_003210.1.
WP_003734055.1. NC_003210.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H33X-ray3.10A98-233[»]
4H37X-ray3.35A/B98-233[»]
ProteinModelPortaliQ8Y5K1.
SMRiQ8Y5K1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60327N.
STRINGi169963.lmo2059.

Protein family/group databases

TCDBi1.A.1.17.2. the voltage-gated ion channel (vic) superfamily.

Proteomic databases

PaxDbiQ8Y5K1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD00137; CAD00137; CAD00137.
GeneIDi988010.
KEGGilmo:lmo2059.
PATRICi20313318. VBILisMon69206_2107.

Phylogenomic databases

eggNOGiENOG41082JI. Bacteria.
COG1226. LUCA.
HOGENOMiHOG000050901.
KOiK10716.
OMAiHISNRIN.
PhylomeDBiQ8Y5K1.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR027359. Channel_four-helix_dom.
IPR013099. K_chnl_dom.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF07885. Ion_trans_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8Y5K1_LISMO
AccessioniPrimary (citable) accession number: Q8Y5K1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 2, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.