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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13
Gene namesi
Name:rplM
Ordered Locus Names:lmo2597
OrganismiListeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Taxonomic identifieri169963 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
Proteomesi
  • UP000000817 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002617441 – 14550S ribosomal protein L13Add BLAST145

Proteomic databases

PaxDbiQ8Y458.
PRIDEiQ8Y458.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi169963.lmo2597.

Structurei

3D structure databases

ProteinModelPortaliQ8Y458.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.

Phylogenomic databases

eggNOGiENOG4108UM5. Bacteria.
COG0102. LUCA.
HOGENOMiHOG000225286.
KOiK02871.
OMAiVLMGKHK.
PhylomeDBiQ8Y458.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8Y458-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTTYMAKPG EVERKWYVID ATGVSLGRLS SEVASILRGK NKPQFTPHID
60 70 80 90 100
TGDFVIIINA GKIGLTGKKA TDKIYYRHSQ YPGGLKSRTA GEMRTNNPEK
110 120 130 140
LLELSIKGML PKNSLGRQLF KKLHVYGGSE HEHAAQQPEV YELRG
Length:145
Mass (Da):16,200
Last modified:March 1, 2002 - v1
Checksum:i639859F661ED907E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591983 Genomic DNA. Translation: CAD00675.1.
PIRiAE1399.
RefSeqiNP_466120.1. NC_003210.1.
WP_003727703.1. NC_003210.1.

Genome annotation databases

EnsemblBacteriaiCAD00675; CAD00675; CAD00675.
GeneIDi984622.
KEGGilmo:lmo2597.
PATRICifig|169963.11.peg.2661.

Similar proteinsi

Entry informationi

Entry nameiRL13_LISMO
AccessioniPrimary (citable) accession number: Q8Y458
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: March 1, 2002
Last modified: October 25, 2017
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families