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Q8Y2X7 (TYPH_RALSO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative thymidine phosphorylase

EC=2.4.2.4
Alternative name(s):
TdRPase
Gene names
Ordered Locus Names:RSc0204
ORF Names:RS00636
OrganismRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum) [Complete proteome] [HAMAP]
Taxonomic identifier267608 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Protein attributes

Sequence length507 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate. HAMAP-Rule MF_00703

Sequence similarities

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 507507Putative thymidine phosphorylase HAMAP-Rule MF_00703
PRO_0000059096

Sequences

Sequence LengthMass (Da)Tools
Q8Y2X7 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: DF121AC8CB2489AA

FASTA50753,886
        10         20         30         40         50         60 
MLAPPEVAAL PDRLTFKPLG IDTWQEHVIY MHPDCAICRA EGFTAQARVE VRIGLRSLIA 

        70         80         90        100        110        120 
TLNLVGSGLL EMCEVSLSVS AVETLMARPG DIVTVSHAPA LESLRAVRAK IYGAHLDTHQ 

       130        140        150        160        170        180 
LASVVGDIAK ERYADVHIAA FLSACAGGRM SVKETIDLTQ AMVDSGECLE WDREIVADKH 

       190        200        210        220        230        240 
CVGGLPGNRT SPIVVAIAAA AGLLLPKTSS RAITSPAGTA DTMETLTRVA LSATELRRVV 

       250        260        270        280        290        300 
DRVGASLAWG GALSLSPADD VLIRVERALD VDSDAQLAAS ILSKKIAAGS THVLIDVPVG 

       310        320        330        340        350        360 
PTAKVRSLQD LERLRMLLER VARSFGVRVT IVRTDGSQPV GRGIGPALEA RDVLAVLQRS 

       370        380        390        400        410        420 
PAAPFDLRER SLLLAATLLE FCGAVEQGAG LEMATGVLDS GAAWRKFEEI CEAQGGLRVP 

       430        440        450        460        470        480 
GEAIFRRDVV AEQDGIVTEI DNRHLARIAK LAGAPMRQVA GVEMHVRLHD QVKAGRPLFT 

       490        500 
IHAQASGELE YSVAYALMHP AVSIAPT 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL646052 Genomic DNA. Translation: CAD13732.1.
RefSeqNP_518325.1. NC_003295.1.

3D structure databases

ProteinModelPortalQ8Y2X7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING267608.RSc0204.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAD13732; CAD13732; RSc0204.
GeneID1219007.
KEGGrso:RSc0204.
PATRIC20258949. VBIRalSol70888_0209.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0213.
HOGENOMHOG000252767.
KOK00758.
OMAFINGVRD.
OrthoDBEOG61ZTGG.

Enzyme and pathway databases

BioCycRSOL267608:GCVU-205-MONOMER.

Family and domain databases

Gene3D3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPMF_00703. Thymid_phosp_2.
InterProIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view]
PANTHERPTHR10515. PTHR10515. 1 hit.
PfamPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFPIRSF000478. TP_PyNP. 1 hit.
SMARTSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTYPH_RALSO
AccessionPrimary (citable) accession number: Q8Y2X7
Entry history
Integrated into UniProtKB/Swiss-Prot: August 29, 2003
Last sequence update: March 1, 2002
Last modified: May 14, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families