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Protein
Submitted name:

Probable methyl-accepting chemotaxis transmembrane protein

Gene

RSc1234

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable methyl-accepting chemotaxis transmembrane proteinImported
Gene namesi
Ordered Locus Names:RSc1234Imported
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)Imported
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
Proteomesi
  • UP000001436 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei182 – 204HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi267608.RSc1234.

Structurei

3D structure databases

ProteinModelPortaliQ8Y011.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini206 – 258HAMPInterPro annotationAdd BLAST53
Domaini263 – 492Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili470 – 501Sequence analysisAdd BLAST32

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK05874.
OMAiRSIAGDM.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
PfamiView protein in Pfam
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8Y011-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAIKLPLA FAAALLLMFA GAIYGIVSLN GSITEYNTTV QARVADERAV
60 70 80 90 100
TSMLVNFKTQ VQEWKDTLLR GKVQATRDKH WAAFGQREQD VAGQARALQA
110 120 130 140 150
SLPPGKSRDL VGQFAAAHAT MGQGYRKGYE SFVAAAFDPT VGDQVVTGVD
160 170 180 190 200
REPSRLLDEA AREIAAESAA VSARTAATAH TVLVVSVVLM LVAFGLGLAG
210 220 230 240 250
AFLFSRSITR PLSRAVEVAR TVAQGDLGSA FEARGSDEIA QLLIALREMQ
260 270 280 290 300
GSLAKVVSEV RRNAEGVASA SAQIASGNLN LSSRTEEQAA SLEETAANMG
310 320 330 340 350
ELTSTVRLNS ENAVQASTLA GHASDTAARG GKVMTDVVET MQGISESSAK
360 370 380 390 400
VGEIIGVIDS IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRTLAQRS
410 420 430 440 450
ASAAKEIKGL IGQSAERVEA GARLVQEAGG IIDEIVASVQ RVTQIVSEIS
460 470 480 490 500
SASAEQSTGI EQVNIAVGQI EEVTQQNAAL VEEASAAAQQ MADQADALRR
510
AVAIFRVDGE AGRA
Length:514
Mass (Da):53,545
Last modified:March 1, 2002 - v1
Checksum:i3AC7DEFF98512FE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646052 Genomic DNA. Translation: CAD14936.1.
RefSeqiWP_011001183.1. NC_003295.1.

Genome annotation databases

EnsemblBacteriaiCAD14936; CAD14936; RSc1234.
GeneIDi1220057.
KEGGirso:RSc1234.
PATRICifig|267608.8.peg.1253.

Similar proteinsi

Entry informationi

Entry nameiQ8Y011_RALSO
AccessioniPrimary (citable) accession number: Q8Y011
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: August 30, 2017
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported