Probable primosomal replication protein n - Ralstonia solanacearum (strain GMI1000)

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Q8XZT7 (Q8XZT7_RALSO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 66. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Probable primosomal replication protein n EMBL CAD15010.1

Gene names

Name:	priB EMBL CAD15010.1
Ordered Locus Names:	RSc1308 EMBL CAD15010.1

Organism

Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum) [Complete proteome] [HAMAP] EMBL CAD15010.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia ›

Protein attributes

Sequence length	108 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 SSB domain. SAAS SAAS000424

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS000424
Cellular component	Primosome SAAS SAAS000424
Ligand	DNA-binding SAAS SAAS000424
Technical term	3D-structure PDB 3EN2 PDB 4FDB Complete proteome
Gene Ontology (GO)
Biological_process	DNA replication, synthesis of RNA primer Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	replisome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	single-stranded DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q8XZT7 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 9DACA6164C48D5AE
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108

11,572

        10         20         30         40         50         60 
MDGTPGHNAI NRLQLVATLA EREVMRYTPA GVPIVNCLLS YSGQAMEAQA ARQVEFSIEA 

        70         80         90        100 
LGAGKMASVL DRIAPGTVLE CVGFLARKHR SSKALVFHIS GCNVFVKD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the plant pathogen Ralstonia solanacearum." Salanoubat M., Genin S., Artiguenave F., Gouzy J., Mangenot S., Arlat M., Billault A., Brottier P., Camus J.-C., Cattolico L., Chandler M., Choisne N., Claudel-Renard C., Cunnac S., Demange N., Gaspin C., Lavie M., Moisan A. Boucher C.A. Nature 415:497-502(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GMI1000 EMBL CAD15010.1.
[2]	"Three-dimensional structure of the protein priB from Ralstonia solanacearum at the resolution 2.3A. Northeast Structural Genomics Consortium target RsR213C." Kuzin A.P., Neely H., Wang H., Sahdev S., Foote E.L., Xiao R., Liu J., Everett J.K., Acton T.B., Rost B, Montelione G.T., Hunt J.F., Tong L. Submitted (SEP-2008) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 9-101.
[3]	"Three-dimensional structure of the protein prib from ralstonia solanacearum at the resolution 1.8a. northeast structural genomics consortium target rsr213c." Kuzin A., Neely H., Seetharaman J., Wang H., Sahdev S., Foote E.L., Xiao R., Liu J., Everett J.K., Acton T.B., Rost B., Montelione G.T., Hunt J.F., Tong L. Submitted (MAY-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 9-101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AL646052 Genomic DNA. Translation: CAD15010.1.

RefSeq

NP_519429.1. NC_003295.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3EN2	X-ray	2.30	A	9-101	[»]
4FDB	X-ray	1.80	A	9-101	[»]

ProteinModelPortal

ModBase

Protein-protein interaction databases

STRING

267608.RSc1308.

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

CAD15010; CAD15010; RSc1308.

GeneID

KEGG

PATRIC

20261233. VBIRalSol70888_1331.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

KO

OMA

ProtClustDB

Family and domain databases

Gene3D

2.40.50.140. 1 hit.

InterPro

IPR012340. NA-bd_OB-fold.
IPR000424. Primosome_PriB/ssb.
IPR023646. Prisomal_replication_PriB.
[Graphical view]

PIRSF

PIRSF003135. Primosomal_n. 1 hit.

SUPFAM

SSF50249. Nucleic_acid_OB. 1 hit.

PROSITE

PS50935. SSB. 1 hit.
[Graphical view]

ProtoNet

Other

EvolutionaryTrace

Entry information

Entry name

Q8XZT7_RALSO

Accession

Primary (citable) accession number: Q8XZT7

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	May 1, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info