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Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-2409-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
Ordered Locus Names:RSc2368Imported
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)Imported
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000001436: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi267608.RSc2368.

Structurei

3D structure databases

ProteinModelPortaliQ8XWV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiAPRFESS.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8XWV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQLVIGLAA IGLMAGCASN AGTGASTGAP AAGTSALATL APKSGSNVQG
60 70 80 90 100
TIKLLQQGDS RVAMAVDIAG LPPNGMFGFH VHEKGDCSSP DGMSAGGHFN
110 120 130 140 150
PTGQPHGDPR SGPHHAGDIP MLQSDASGKA VGSIVLNGVT LTPGATSLVG
160 170 180
RAVIVHAGMD DYKTQPTGNS GGRVACGVIV AN
Length:182
Mass (Da):17,774
Last modified:March 1, 2002 - v1
Checksum:i045A93B59DA25AB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646052 Genomic DNA. Translation: CAD16075.1.
RefSeqiNP_520489.1. NC_003295.1.
WP_011002291.1. NC_003295.1.

Genome annotation databases

EnsemblBacteriaiCAD16075; CAD16075; RSc2368.
GeneIDi1221214.
KEGGirso:RSc2368.
PATRICi20263431. VBIRalSol70888_2408.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646052 Genomic DNA. Translation: CAD16075.1.
RefSeqiNP_520489.1. NC_003295.1.
WP_011002291.1. NC_003295.1.

3D structure databases

ProteinModelPortaliQ8XWV2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi267608.RSc2368.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD16075; CAD16075; RSc2368.
GeneIDi1221214.
KEGGirso:RSc2368.
PATRICi20263431. VBIRalSol70888_2408.

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.
OMAiAPRFESS.
OrthoDBiEOG6K13RS.

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-2409-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GMI1000Imported.

Entry informationi

Entry nameiQ8XWV2_RALSO
AccessioniPrimary (citable) accession number: Q8XWV2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: February 4, 2015
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.