Q8XVQ5 (Q8XVQ5_RALSO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable harpin protein with pectate lyase domain EMBL CAD16482.1

Gene names

Name:	popW EMBL CAD16482.1
Ordered Locus Names:	RSc2775

Organism

Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum) [Complete proteome] [HAMAP]

Taxonomic identifier

267608 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAD16482.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8XVQ5 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 06777197E97365D1	FASTA	380	39,810
	10 20 30 40 50 60 MSIQIDRPNN HFQTPSTWNH DAGSSIDTSQ LQRAVQLLDQ VLQQLEARKL FGNMLNQPGA 70 80 90 100 110 120 DNAGQNHAGG HGGGHHGGSN GFGENGRFGS PHANSPAQPD LELPANKPNN GKHNTSASTP 130 140 150 160 170 180 DTQTAPSSTS PTTGTSPTPT STSATEGKVA YGVKPPEPTG VVDVSKPIVV KAGETFDGGG 190 200 210 220 230 240 KYYRPTKEMG DGSQNEHQKP LFILEPGATL KNVQYSGGDG IHLLGSAKLD RVVNRQVGED 250 260 270 280 290 300 AITIDGAKNR AHDAKIAGID PASIPGGTPK VEITNSAFYG AKDKLAQING DVDLQVKGMY 310 320 330 340 350 360 VNGAGKVFRT NGGDTQIKAT VNVQDSNFQN VSEAVFRTDS KFSTASFSDD VKSDAPFDGL 370 380 APDKSQVTGT NKVSYKAYSG

References

[1]

"Genome sequence of the plant pathogen Ralstonia solanacearum." Salanoubat M., Genin S., Artiguenave F., Gouzy J., Mangenot S., Arlat M., Billault A., Brottier P., Camus J.-C., Cattolico L., Chandler M., Choisne N., Claudel-Renard C., Cunnac S., Demange N., Gaspin C., Lavie M., Moisan A. , Robert C., Saurin W., Schiex T., Siguier P., Thebault P., Whalen M., Wincker P., Levy M., Weissenbach J., Boucher C.A. Nature 415:497-502(2002) [PubMed: 11823852] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GMI1000.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL646052 Genomic DNA. Translation: CAD16482.1.
RefSeq	NP_520896.1. NC_003295.1.
3D structure databases
HSSP	HSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ProteinModelPortal	Q8XVQ5.
ModBase	Search...
Protein family/group databases
CAZy	PL3. Polysaccharide Lyase Family 3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1221622.
GenomeReviews	Gene locus RSc2775 in contig AL646052_GR.
KEGG	rso:RSc2775.
NMPDR	fig|267608.1.peg.2775.
PATRIC	20264263. VBIRalSol70888_2823.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	EDAITID.
ProtClustDB	CLSK2753747.
Enzyme and pathway databases
BioCyc	RSOL267608:RSC2775-MONOMER.
Family and domain databases
InterPro	IPR004898. Pectate_lyase_cat. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF03211. Pectate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q8XVQ5_RALSO

Accession

Primary (citable) accession number: Q8XVQ5

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)