Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative methyl-accepting chemotaxis transmembrane protein

Gene

RSc3307

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative methyl-accepting chemotaxis transmembrane proteinImported
Gene namesi
Ordered Locus Names:RSc3307Imported
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)Imported
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
Proteomesi
  • UP000001436 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei55 – 78HelicalSequence analysisAdd BLAST24
Transmembranei319 – 340HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi267608.RSc3307.

Structurei

3D structure databases

ProteinModelPortaliQ8XU86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini340 – 394HAMPInterPro annotationAdd BLAST55
Domaini399 – 628Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
KOiK03406.
OMAiFHEMVAT.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR033479. dCache_1.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
PfamiView protein in Pfam
PF02743. dCache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8XU86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRESSQVPRS PAVAFSTCAF RPAVAGVRCR HRGTQSDSSP TSKKRITMSS
60 70 80 90 100
LRTRILVISS ATVIGALALS GAATYAIVRA STLASIDQNL TAIASGNTLA
110 120 130 140 150
IDKWVTAKAQ AVKATAEAVE YGDPHGLVKH MGDADGFPIT TVGWTDKTFF
160 170 180 190 200
STSAGTPKDY DPTARPWYKS AIAAGKPTVT KPYGDASTGV PYVSFAAPLM
210 220 230 240 250
RNGAATGALS GAVPLDGVRE VVAAVHPTPS SLAFVVARDG QVIAHPDAKL
260 270 280 290 300
MLKPVTEVSA ALTPDALTSL AKATAPLEVE LAGAAKLLKA QAVQGTDWYL
310 320 330 340 350
VIALDKAEAT AGLRSVARAL GVAMVLLTLA AVGIAAFFTA QSFRRLSQVR
360 370 380 390 400
DAMDTIGSGG GDLTHRLPVV GNDEVAQISA SFNTFIDKIG EVLLEVRASV
410 420 430 440 450
ENMKSATGEI EMGNRDLSLR TETSASNLQE TSAALTELTT SVKNSAEAAV
460 470 480 490 500
QATRLAGEAS EAAVRGGEVV SGAVSTMDAI AQSSSRISEI IGVIDSIAFQ
510 520 530 540 550
TNILALNAAV EAARAGENGR GFAVVAGEVR TLAQRSAAAA REIKALIQAS
560 570 580 590 600
EASVKAGAER VDAAGATMRE IVEGIQRVSR IIGEIDGAMH EQSAGISQID
610 620 630 640
RSVAEMDQAT QQNAALVEQS TAASSMLNEQ AHGLARTVGL FRLRGG
Length:646
Mass (Da):66,737
Last modified:March 1, 2002 - v1
Checksum:i8C9FE4FB2E2959AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646052 Genomic DNA. Translation: CAD17095.1.

Genome annotation databases

EnsemblBacteriaiCAD17095; CAD17095; RSc3307.
KEGGirso:RSc3307.

Similar proteinsi

Entry informationi

Entry nameiQ8XU86_RALSO
AccessioniPrimary (citable) accession number: Q8XU86
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: August 30, 2017
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported