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Q8XT76

- GLGB_RALSO

UniProt

Q8XT76 - GLGB_RALSO

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei454 – 4541NucleophileUniRule annotation
Active sitei507 – 5071Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-3742-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:RSp0239
ORF Names:RS06097
Encoded oniPlasmid megaplasmid Rsp0 Publication
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000001436: Plasmid megaplasmid Rsp

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7757751,4-alpha-glucan branching enzyme GlgBPRO_0000188733Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi267608.RSp0239.

Structurei

3D structure databases

ProteinModelPortaliQ8XT76.
SMRiQ8XT76. Positions 162-774.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8XT76-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTSVHDFATA TRPATPSAAA QEPAPALPPG LDRNTLDALT HGRLGDPFAV
60 70 80 90 100
LGPHRLETAE GERPHRVVRA FHPGARRVQA IDPRGQVMAE LAPVGRTGLF
110 120 130 140 150
HGRLPDDAPD ADGHPGAYRL RVVWPAGAGH EAVQEAEDPY AFGLLLGDLD
160 170 180 190 200
LHLIAEGRHW ELARCLGAQA MRQDDVAGVR FAVWAPNARR VSVVGDFNQW
210 220 230 240 250
DGRRHPMRLR HGTGVWELFV PAGLGAGPGS RYKFELVGAD GHLLVKADPV
260 270 280 290 300
ARRTEAPPAT ASVVADPLPF RWSDAAWMET RAARQRPDAP IAIYEVHAGS
310 320 330 340 350
WLRDVEDGGR SLDWDALGER LIPYVAGLGF THVELLPVAE HPFGGSWGYQ
360 370 380 390 400
PLGLFAPSAR FGPPEAFARF VERCHQAALG VIVDWVPAHF PSDPHGLARF
410 420 430 440 450
DGTALYEHAD PREGFHQDWN TLIYNFGRHE VRGFLIASAL EWLEHFHIDG
460 470 480 490 500
LRVDAVASML YRDYSRPADA WVPNRYGGRE NLEAVAFLQQ MNAVVHARCP
510 520 530 540 550
GAITIAEEST AWPGVTAAVE FNGLGFDYKW NMGWMHDTLH YMQRDPIYRQ
560 570 580 590 600
HHHDGLTFGL VYAFSERFIL PLSHDEVVHG KGSLLGKMPG DDWQRLANLR
610 620 630 640 650
AYLAFMWTHP GKKLLFMGGE FGQLGEWNHD AAPEWHLLDD PRHRGVQRLV
660 670 680 690 700
HDLNALYRSE PALHARDCAP EGFSWVIGDD RANSVFAYLR LDTAGTPMLI
710 720 730 740 750
VANMTPVPRD GYRIGVPDVD GAVRWREMLN TDSAVYGGTN LGNGGVVDVE
760 770
DVESHGWRRS VVVRLPPLAV VVLKV
Length:775
Mass (Da):85,728
Last modified:March 1, 2002 - v1
Checksum:iF6A3496E6A56D56F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD17390.1.
RefSeqiNP_521800.1. NC_003296.1.

Genome annotation databases

EnsemblBacteriaiCAD17390; CAD17390; RSp0239.
GeneIDi1222370.
KEGGirso:RSp0239.
PATRICi20266071. VBIRalSol70888_3708.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD17390.1 .
RefSeqi NP_521800.1. NC_003296.1.

3D structure databases

ProteinModelPortali Q8XT76.
SMRi Q8XT76. Positions 162-774.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 267608.RSp0239.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAD17390 ; CAD17390 ; RSp0239 .
GeneIDi 1222370.
KEGGi rso:RSp0239.
PATRICi 20266071. VBIRalSol70888_3708.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci RSOL267608:GCVU-3742-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GMI1000.

Entry informationi

Entry nameiGLGB_RALSO
AccessioniPrimary (citable) accession number: Q8XT76
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 15, 2003
Last sequence update: March 1, 2002
Last modified: October 29, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3