Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Probable methyl-accepting chemotaxis transducer transmembrane protein

Gene

RSp0255

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-3758-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable methyl-accepting chemotaxis transducer transmembrane proteinImported
Gene namesi
Ordered Locus Names:RSp0255Imported
Encoded oniPlasmid megaplasmid RspImported
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)Imported
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000001436 Componenti: Plasmid megaplasmid Rsp

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei164 – 18724HelicalSequence analysisAdd
BLAST
Transmembranei207 – 22721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ8XT60.
SMRiQ8XT60. Positions 306-528.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 5026PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST
Domaini228 – 28053HAMPInterPro annotationAdd
BLAST
Domaini285 – 514230Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili304 – 32421Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

OMAiGNIQTID.
OrthoDBiEOG67HJQK.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8XT60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNNLPVTDA ETTLAPADYL ISRTDPAGRI VFANPAFVRI SGFTEAELIG
60 70 80 90 100
APHNVVRHPD MPEAAFADLW ATLRSGQSWR GLVKNRRKDG GFYWVQANVT
110 120 130 140 150
PVLQDGAIAG YTSVRSMATP AQIARAGRVY AAIRAGDASY AVRSGRILRT
160 170 180 190 200
GWRRLFNLFR IDSLRLRVIG LQSLIAVAIL IGTLWAHLAL EAADLRGMPW
210 220 230 240 250
LVLSRDWLWL TGVGCAGLAT LSGLLLARTL IRPLEQAAAL ATRLAAGDLT
260 270 280 290 300
STLEARGNDE IGDVVRAMGT MRASLWSIVR DIQDGAANVA HSTLQISAGN
310 320 330 340 350
HDLSARTEQQ AAALQETASS MEQLTSMVAR NADHAREASV LAEQASSVAT
360 370 380 390 400
DGGRIVQRVV DTMGAIRGSS RHVTDIIATI ESIAFQTNIL ALNAAVEAAR
410 420 430 440 450
AGEEGRGFAV VAGEVRSLAQ RSAQAAAQTK AIIQASDQSV RDGEALVQQA
460 470 480 490 500
GATMQQIVAS VQTVTQLISE ISASSREQSS GIAQINTSVS QLDGVTQQNA
510 520
TLVEKAAAAA SVLAGQSEAL KRAVAVFRA
Length:529
Mass (Da):56,011
Last modified:March 1, 2002 - v1
Checksum:i29617C4067D232F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD17406.1.
RefSeqiWP_011003569.1. NC_003296.1.

Genome annotation databases

EnsemblBacteriaiCAD17406; CAD17406; RSp0255.
GeneIDi1222386.
KEGGirso:RSp0255.
PATRICi20266109. VBIRalSol70888_3727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD17406.1.
RefSeqiWP_011003569.1. NC_003296.1.

3D structure databases

ProteinModelPortaliQ8XT60.
SMRiQ8XT60. Positions 306-528.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD17406; CAD17406; RSp0255.
GeneIDi1222386.
KEGGirso:RSp0255.
PATRICi20266109. VBIRalSol70888_3727.

Phylogenomic databases

OMAiGNIQTID.
OrthoDBiEOG67HJQK.

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-3758-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF08447. PAS_3. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GMI1000Imported.

Entry informationi

Entry nameiQ8XT60_RALSO
AccessioniPrimary (citable) accession number: Q8XT60
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: December 9, 2015
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.