Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Megaplasmid complete sequence

Gene

RSp1027

Organism
Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-4536-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Megaplasmid complete sequenceImported
Gene namesi
Ordered Locus Names:RSp1027Imported
Encoded oniPlasmid megaplasmid RspImported
OrganismiRalstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum)Imported
Taxonomic identifieri267608 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000001436 Componenti: Plasmid megaplasmid Rsp

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ8XR41.
SMRiQ8XR41. Positions 291-514.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK03406.
OMAiRNILWIA.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8XR41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQAIMHSVRF KILCAFGVCI ALLAISGIFA VRGLMRLNGN ITDAYTGNTI
60 70 80 90 100
PIAQLAEVRA TQLDLRLQMR RTQALKDDAA EVTAAIQAIR TDVEQTNRVW
110 120 130 140 150
KQYFPDSITS DKEREVATKI NDTLPKFNDA ANKAVDALRA GNLDAAGQII
160 170 180 190 200
NGNSATGTSI SEWLAQDIEI NLEQAKDFMT DSAATYQRIL LVTIALVCAG
210 220 230 240 250
IVVGGAMSWY LLRAISRPLS RAVDVANHIA GGTLENEIVI DSQGEFGELL
260 270 280 290 300
IALRKMDRQL ADTVRGIKAS AESVTVASQE IAAGNVDLSA RTEQQAASLE
310 320 330 340 350
ETASSMTQLT ETVKQNAENA AQANTLAASA STMAQAGNDA VQEMVGTIDK
360 370 380 390 400
ISTSSGKISE ITGLIEGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV
410 420 430 440 450
RTLAQRSAAA AKEIKELIGS SVAVVQEGSK QAVEVGQNMG QVKEAIRRVS
460 470 480 490 500
DIVSEIAAAS AEQSRGIEQV NQAVTQMDEV TQQNAALVEQ AAAAAQSLEE
510 520
QATSLRRAVS VFRLPDGTTR TALA
Length:524
Mass (Da):55,474
Last modified:March 1, 2002 - v1
Checksum:iBF65A99ADF1E2827
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD18178.1.
RefSeqiNP_522588.1. NC_003296.1.
WP_011004317.1. NC_003296.1.

Genome annotation databases

EnsemblBacteriaiCAD18178; CAD18178; RSp1027.
GeneIDi1223339.
KEGGirso:RS02364.
PATRICi20267683. VBIRalSol70888_4509.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL646053 Genomic DNA. Translation: CAD18178.1.
RefSeqiNP_522588.1. NC_003296.1.
WP_011004317.1. NC_003296.1.

3D structure databases

ProteinModelPortaliQ8XR41.
SMRiQ8XR41. Positions 291-514.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD18178; CAD18178; RSp1027.
GeneIDi1223339.
KEGGirso:RS02364.
PATRICi20267683. VBIRalSol70888_4509.

Phylogenomic databases

KOiK03406.
OMAiRNILWIA.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciRSOL267608:GCVU-4536-MONOMER.

Family and domain databases

InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GMI1000Imported.

Entry informationi

Entry nameiQ8XR41_RALSO
AccessioniPrimary (citable) accession number: Q8XR41
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: June 24, 2015
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.