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Q8XPA1 (GLGA_CLOPE) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:CPE0064
OrganismClostridium perfringens (strain 13 / Type A) [Complete proteome] [HAMAP]
Taxonomic identifier195102 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Glycogen synthase HAMAP-Rule MF_00484
PRO_0000188608

Sites

Binding site211ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q8XPA1 [UniParc].

Last modified March 5, 2002. Version 1.
Checksum: 83640EBF2CE7E9DC

FASTA48255,082
        10         20         30         40         50         60 
MEGFKLIKVL FATSEANPFI KTGGLGDVMG ALPKELKRKG IDARVILPKY SAIKGELLDK 

        70         80         90        100        110        120 
LSFKKWFMVP VGWRNQYCGV YQCEYDEVIY YLLDSEFYFH RNGLYGEGDD GERFAFFDRA 

       130        140        150        160        170        180 
VLETLKEIDW CPDIIHCNDW QTGMIPVLHK LEYSKDPFYK NIKTVTSIHN LLFQGNFSAD 

       190        200        210        220        230        240 
VLPELFGYDY EPVRNGSLEF YGGMSFMKGA INYSDRILTV SETYAKEIKT PYFGENLDGL 

       250        260        270        280        290        300 
LRERGYALKG IVNGIDYDEF NPSKDSLIAK NFSVKTIEDK VLNKLALQKE LGLPINPDIP 

       310        320        330        340        350        360 
MISIVSRLTN QKGCDLIVNI ANRLLQRNVQ LVILGTGDYN YENHFKGLQE LYPTKVSANI 

       370        380        390        400        410        420 
KFDNGLAHRI YASSDIFLMP SLFEPCGLGQ LIALRYGAIP IVRETGGLKD TIHSYNKYTG 

       430        440        450        460        470        480 
IGNGFSFTNY NHNDLMHVIE LALETYDDKE IWRSLIIQAM DSDNSWNKSA EKYKELYEEL 


IK 

« Hide

References

[1]"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater."
Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H.
Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 13 / Type A.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000016 Genomic DNA. Translation: BAB79770.1.
RefSeqNP_560980.1. NC_003366.1.

3D structure databases

ProteinModelPortalQ8XPA1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING195102.CPE0064.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB79770; BAB79770; BAB79770.
GeneID988297.
KEGGcpe:CPE0064.
PATRIC19493994. VBICloPer59675_0122.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycCPER195102:GJFM-81-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CLOPE
AccessionPrimary (citable) accession number: Q8XPA1
Entry history
Integrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: March 5, 2002
Last modified: February 19, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways