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Protein

Glycogen synthase

Gene

glgA

Organism
Clostridium perfringens (strain 13 / Type A)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei21 – 211ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciCPER195102:GJFM-81-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:CPE0064
OrganismiClostridium perfringens (strain 13 / Type A)
Taxonomic identifieri195102 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000818 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 482482Glycogen synthasePRO_0000188608Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ8XPA1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8XPA1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGFKLIKVL FATSEANPFI KTGGLGDVMG ALPKELKRKG IDARVILPKY
60 70 80 90 100
SAIKGELLDK LSFKKWFMVP VGWRNQYCGV YQCEYDEVIY YLLDSEFYFH
110 120 130 140 150
RNGLYGEGDD GERFAFFDRA VLETLKEIDW CPDIIHCNDW QTGMIPVLHK
160 170 180 190 200
LEYSKDPFYK NIKTVTSIHN LLFQGNFSAD VLPELFGYDY EPVRNGSLEF
210 220 230 240 250
YGGMSFMKGA INYSDRILTV SETYAKEIKT PYFGENLDGL LRERGYALKG
260 270 280 290 300
IVNGIDYDEF NPSKDSLIAK NFSVKTIEDK VLNKLALQKE LGLPINPDIP
310 320 330 340 350
MISIVSRLTN QKGCDLIVNI ANRLLQRNVQ LVILGTGDYN YENHFKGLQE
360 370 380 390 400
LYPTKVSANI KFDNGLAHRI YASSDIFLMP SLFEPCGLGQ LIALRYGAIP
410 420 430 440 450
IVRETGGLKD TIHSYNKYTG IGNGFSFTNY NHNDLMHVIE LALETYDDKE
460 470 480
IWRSLIIQAM DSDNSWNKSA EKYKELYEEL IK
Length:482
Mass (Da):55,082
Last modified:March 5, 2002 - v1
Checksum:i83640EBF2CE7E9DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000016 Genomic DNA. Translation: BAB79770.1.
RefSeqiNP_560980.1. NC_003366.1.
WP_011009597.1. NC_003366.1.

Genome annotation databases

EnsemblBacteriaiBAB79770; BAB79770; BAB79770.
KEGGicpe:CPE0064.
PATRICi19493994. VBICloPer59675_0122.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000016 Genomic DNA. Translation: BAB79770.1.
RefSeqiNP_560980.1. NC_003366.1.
WP_011009597.1. NC_003366.1.

3D structure databases

ProteinModelPortaliQ8XPA1.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB79770; BAB79770; BAB79770.
KEGGicpe:CPE0064.
PATRICi19493994. VBICloPer59675_0122.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiNLQINGM.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciCPER195102:GJFM-81-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 13 / Type A.

Entry informationi

Entry nameiGLGA_CLOPE
AccessioniPrimary (citable) accession number: Q8XPA1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 5, 2002
Last sequence update: March 5, 2002
Last modified: June 24, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.