Putative uncharacterized protein CPE0329 - Clostridium perfringens

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Q8XNK4 (Q8XNK4_CLOPE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 41. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein CPE0329 EMBL BAB80035.1

Gene names

Ordered Locus Names:

CPE0329

Organism

Clostridium perfringens [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	795 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Calcium PDB 2VNG PDB 2VNO PDB 2VNR Metal-binding PDB 2VNG PDB 2VNO PDB 2VNR
Technical term	3D-structure PDB 2VNG PDB 2VNO PDB 2VNR Complete proteome
Gene Ontology (GO)
Molecular function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

1

Calcium; via carbonyl oxygen PDB 2VNG PDB 2VNO PDB 2VNR

Metal binding

1

Calcium; via carbonyl oxygen PDB 2VNG PDB 2VNO PDB 2VNR

Metal binding

1

Calcium; via carbonyl oxygen PDB 2VNG PDB 2VNO PDB 2VNR

Metal binding

1

Calcium PDB 2VNG PDB 2VNO PDB 2VNR

Sequences

Sequence

Length

Mass (Da)

Tools

Q8XNK4 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: B2E0139CB6405175
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795

90,512

        10         20         30         40         50         60 
MKNNLKKYIK YILSVILVFF VGVNGMEVYA LEESRDVYLS DLDWLNATHG DDTKSKIVQK 

        70         80         90        100        110        120 
NHPFTPGNNN QSTKISLKME DGSISEFEKG LGTIAGSPST ITYDISGAGV TKFFSYLGID 

       130        140        150        160        170        180 
RSANPINEQY AKVDKIEVVV DGKVIYSTIN QFPNGLTYET PAIKVDLNIP ENAKRLQLKS 

       190        200        210        220        230        240 
YAGEKTWGDE VVYADAKFTA KGDFVNPNDW TPAEKRREIS NEKPLLMIPL YANGSKYEKG 

       250        260        270        280        290        300 
DYAFWGDDTL VGKWKEVPDD LKPYTVIQLH PDDLPKRDGV AADFYEHMLN EAQSYVNPKT 

       310        320        330        340        350        360 
NKNEPIPIVL TVYTAGNVPG YTAAHWLTTE WIEDMYSKYS ALQGVFSTEN YWVWTDNVES 

       370        380        390        400        410        420 
NAAEYLKLSA KYGGYFIWSE QNNGGSIEKA FGSNGKTVFK EAVEKYWENF IFMYKNTPQA 

       430        440        450        460        470        480 
EGNDAPTSSY MTGLWLTDYA YQWGGLMDTW KWYETGKWKL FESGNIGKTQ GNRQWLTEPE 

       490        500        510        520        530        540 
ALLGIEAMNI YLNGGCVYNF EHPAYTYGVR NEESPLFSNV IKEFFRYVIN NPSPSKNEMR 

       550        560        570        580        590        600 
AKTKSLLYGN FTQNGNGNYF VGLNTEMSQS PAYTTGRYGN IPAVPSSIER NKIESRLSGS 

       610        620        630        640        650        660 
QIKLIDMNSS ELSNITNRKE YFNKLYKEEY NGNIFAQKLD NRWFIYNYKY NENINQKGSF 

       670        680        690        700        710        720 
DIANIKSEVT LEPHTYLIME DNNQSINIKL NNYRTNKDSL WEGAKNADEA KKLPEMSKVD 

       730        740        750        760        770        780 
ALNWVYDSYI KNTNNGEKRT SVIKLMNIDK APTITNVNGI EGSYDIPTVK YNSETRSAEI 

       790 
TIKNNGNIDF DIVIK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater." Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H. Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed: 11792842] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 13 / Type A.
[2]	"Divergent modes of glycan recognition by a new family of carbohydrate-binding modules." Gregg K.J., Finn R., Abbott D.W., Boraston A.B. J. Biol. Chem. 283:12604-12613(2008) [PubMed: 18292090] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 27-206 IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000016 Genomic DNA. Translation: BAB80035.1.

RefSeq

NP_561245.1. NC_003366.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2VNG	X-ray	1.40	A/B	27-206	[»]
2VNO	X-ray	1.45	A/B	27-206	[»]
2VNR	X-ray	1.55	A	27-206	[»]

ProteinModelPortal

SMR

Q8XNK4. Positions 33-205.

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

GeneID

GenomeReviews

Gene locus CPE0329 in contig BA000016_GR.

KEGG

NMPDR

fig|195102.1.peg.392.

PATRIC

19494560. VBICloPer59675_0385.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

ProtClustDB

Family and domain databases

InterPro

IPR013222. Glyco_hyd_98_carb-bd.
IPR013191. Glyco_hydro_98.
IPR013190. Glyco_hydro_98_C.
[Graphical view]

Pfam

PF08307. Glyco_hydro_98C. 1 hit.
PF08306. Glyco_hydro_98M. 1 hit.
PF08305. NPCBM. 1 hit.
[Graphical view]

SMART

SM00776. NPCBM. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q8XNK4_CLOPE

Accession

Primary (citable) accession number: Q8XNK4

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info