Unreviewed, UniProtKB/TrEMBL Q8XMY5 (Q8XMY5_CLOPE)

Names and origin

Protein names

Submitted name:
    Exo-alpha-sialidase EMBL BAB80259.1

Gene names

Name:	nanJ EMBL BAB80259.1
Ordered Locus Names:	CPE0553

Organism

Clostridium perfringens [Complete proteome] [HAMAP]

Taxonomic identifier

1502 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1173 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718V1

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell adhesion Inferred from electronic annotation. Source: InterPro
Molecular function	exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8XMY5-1 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 276A1E0A43A788CA	FASTA	1,173	128,782
	10 20 30 40 50 60 MKSKKIIATL VASLVISNMG GYLVKANPNV NHKAVIIEDR QAIIETAIPQ SEMTASATSE 70 80 90 100 110 120 EGQDPASSAI DGNINTMWHT KWNGSDALPQ SLSVNLGKAR KVSSIAITPR TSGNNGFITK 130 140 150 160 170 180 YEIHAINNGV ETLVAEGTWE ENNLVKTVTF DSPIDAEEIK ITAIQGVGGF ASIAELNVYE 190 200 210 220 230 240 IKGEVDEIAN YGNLKITKEE ERLNITGDLE KFSSLDEGTI VTRFNMNDTS IQSLIGLSDG 250 260 270 280 290 300 NKANNYFSLY VSGGKVGYEL RRQEGNGDFN VHHSADVTFN KGINTLALKI EKGVGAKIFL 310 320 330 340 350 360 NGSLVKTVSD PNIKFLNAIN LNSGFIGKTD RANGYNEYLF RGNIDFMNIY DKPVSDNYLL 370 380 390 400 410 420 RKTGETKAPS EDSLLPDDVY KTQPVELFYP GYLESRGYRI PALETTKKGT VLASIDVRNN 430 440 450 460 470 480 GDHDAPNNNI DVGIRRKEVN GEWEEGKVIL DYPGKSAAID TSLMSATIEE NGIEKERIFL 490 500 510 520 530 540 IVTHFPEGYG FPNTEGGSGY KEIDGKYYFI LKDAQNNEYT VREDGIVYNS EGNQTDYVMK 550 560 570 580 590 600 NDKTLIQNGE EVGNALLSNS PLKAVGTAHI EMIYSDDDGK TWSEPEDLNP GLKKEWMKFF 610 620 630 640 650 660 GTAPGKGIQI KNGEHKGRLV FPIYYTNQNN FQSSAVIYSD DFGETWKLGE SPIDTASVSS 670 680 690 700 710 720 ETVSSGTQLT ECQVVEMPNG QLKLFMRNTG SYTKIATSFD GGATWHDEVP EDTSLREPYC 730 740 750 760 770 780 QLSVINYSGK INGKDAIIFS NPDASSRVNG SVKVGLINEN GTYDNGEPRY EFDWIYNKTV 790 800 810 820 830 840 KPGSFAYSCL TELPDGNLGL FYEGEGAGRM AYTEFDLNYL KFNASEDSPS ASVQSIEVLD 850 860 870 880 890 900 EDLAYNSGEE VSIKVNFNQL VSIIGDRKIT LDIGGVDVPL NMVNYEGKSS AIFKGTIPEG 910 920 930 940 950 960 INQGNYEIKL KENNTLELNT VYNKVSTFNG LDNTGINVQI GELKTTVGNS TIKVNDEVQV 970 980 990 1000 1010 1020 GSAFEAILGI EGLNGDTEVY SAEYLFEYNV EAFILNEITS FNDSLFVKSK EVEPGKVRIL 1030 1040 1050 1060 1070 1080 VASLGNEIEK DSDLVKVNLT PKISSELEVL GLTTALVGAG DGNTHDLELS SKEVKINEEA 1090 1100 1110 1120 1130 1140 SGEIVVNPVQ NFEIPEINKK NVKLTWNAPI TTEGLEGYVI YKDGKKLSEV PAESTEFVVS 1150 1160 1170 KLNRHTIYNF KVAAKYSNGE LSAKESKTIR TAR

References

[1]	"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater." Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H. Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed: 11792842] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 13 / Type A.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBLGenBankDDBJ

BA000016 Genomic DNA. Translation: BAB80259.1.

RefSeq

NP_561469.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2V72	X-ray	2.25	A	42-180	[»]

ModBase

Search...

Protein family/group databases

CAZy

CBM32. Carbohydrate-Binding Module Family 32.
CBM40. Carbohydrate-Binding Module Family 40.
GH33. Glycoside Hydrolase Family 33.

Genome annotation databases

GeneID

988807.

GenomeReviews

Gene locus CPE0553 in contig BA000016_GR.

KEGG

cpe:CPE0553.

NMPDR

fig|195102.1.peg.616.

Organism-specific databases

CMR

Search...

Phylogenomic databases

HOGENOM

Q8XMY5.

OMA

Q8XMY5. EVDEIAN.

Enzyme and pathway databases

BioCyc

CPER195102:CPE0553-MON.

Family and domain databases

InterPro

IPR002860. BNR.
IPR000421. Coagulation_factor_5/8-type_C.
IPR013320. ConA-like_subgrp.
IPR008957. Fibronectin_typ-III-like_fold.
IPR003961. FN_III.
IPR004124. Glyco_hydro_33_N.
[Graphical view]

Gene3D

G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
G3DSA:2.60.40.30. FN_III-like. 1 hit.

Pfam

PF02012. BNR. 2 hits.
PF00754. F5_F8_type_C. 1 hit.
PF00041. fn3. 1 hit.
PF02973. Sialidase. 1 hit.
[Graphical view]

SMART

SM00060. FN3. 1 hit.
[Graphical view]

PROSITE

PS50022. FA58C_3. 1 hit.
PS50853. FN3. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q8XMY5_CLOPE

Accession

Primary (citable) accession number: Q8XMY5

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	June 16, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)