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Unreviewed, UniProtKB/TrEMBL Q8XMY5 (Q8XMY5_CLOPE)

Last modified June 16, 2009. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Exo-alpha-sialidase EMBL BAB80259.1
Gene names
Name: nanJ EMBL BAB80259.1
Ordered Locus Names: CPE0553
OrganismClostridium perfringens [Complete proteome] [HAMAP]
Taxonomic identifier1502 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length1173 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718V1

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

cell adhesion

Inferred from electronic annotation. Source: InterPro

   Molecular functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8XMY5-1 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 276A1E0A43A788CA

FASTA1,173128,782
        10         20         30         40         50         60 
MKSKKIIATL VASLVISNMG GYLVKANPNV NHKAVIIEDR QAIIETAIPQ SEMTASATSE 

        70         80         90        100        110        120 
EGQDPASSAI DGNINTMWHT KWNGSDALPQ SLSVNLGKAR KVSSIAITPR TSGNNGFITK 

       130        140        150        160        170        180 
YEIHAINNGV ETLVAEGTWE ENNLVKTVTF DSPIDAEEIK ITAIQGVGGF ASIAELNVYE 

       190        200        210        220        230        240 
IKGEVDEIAN YGNLKITKEE ERLNITGDLE KFSSLDEGTI VTRFNMNDTS IQSLIGLSDG 

       250        260        270        280        290        300 
NKANNYFSLY VSGGKVGYEL RRQEGNGDFN VHHSADVTFN KGINTLALKI EKGVGAKIFL 

       310        320        330        340        350        360 
NGSLVKTVSD PNIKFLNAIN LNSGFIGKTD RANGYNEYLF RGNIDFMNIY DKPVSDNYLL 

       370        380        390        400        410        420 
RKTGETKAPS EDSLLPDDVY KTQPVELFYP GYLESRGYRI PALETTKKGT VLASIDVRNN 

       430        440        450        460        470        480 
GDHDAPNNNI DVGIRRKEVN GEWEEGKVIL DYPGKSAAID TSLMSATIEE NGIEKERIFL 

       490        500        510        520        530        540 
IVTHFPEGYG FPNTEGGSGY KEIDGKYYFI LKDAQNNEYT VREDGIVYNS EGNQTDYVMK 

       550        560        570        580        590        600 
NDKTLIQNGE EVGNALLSNS PLKAVGTAHI EMIYSDDDGK TWSEPEDLNP GLKKEWMKFF 

       610        620        630        640        650        660 
GTAPGKGIQI KNGEHKGRLV FPIYYTNQNN FQSSAVIYSD DFGETWKLGE SPIDTASVSS 

       670        680        690        700        710        720 
ETVSSGTQLT ECQVVEMPNG QLKLFMRNTG SYTKIATSFD GGATWHDEVP EDTSLREPYC 

       730        740        750        760        770        780 
QLSVINYSGK INGKDAIIFS NPDASSRVNG SVKVGLINEN GTYDNGEPRY EFDWIYNKTV 

       790        800        810        820        830        840 
KPGSFAYSCL TELPDGNLGL FYEGEGAGRM AYTEFDLNYL KFNASEDSPS ASVQSIEVLD 

       850        860        870        880        890        900 
EDLAYNSGEE VSIKVNFNQL VSIIGDRKIT LDIGGVDVPL NMVNYEGKSS AIFKGTIPEG 

       910        920        930        940        950        960 
INQGNYEIKL KENNTLELNT VYNKVSTFNG LDNTGINVQI GELKTTVGNS TIKVNDEVQV 

       970        980        990       1000       1010       1020 
GSAFEAILGI EGLNGDTEVY SAEYLFEYNV EAFILNEITS FNDSLFVKSK EVEPGKVRIL 

      1030       1040       1050       1060       1070       1080 
VASLGNEIEK DSDLVKVNLT PKISSELEVL GLTTALVGAG DGNTHDLELS SKEVKINEEA 

      1090       1100       1110       1120       1130       1140 
SGEIVVNPVQ NFEIPEINKK NVKLTWNAPI TTEGLEGYVI YKDGKKLSEV PAESTEFVVS 

      1150       1160       1170 
KLNRHTIYNF KVAAKYSNGE LSAKESKTIR TAR 

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References

[1]"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater."
Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H.
Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed: 11792842] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 13 / Type A.
+Additional computationally mapped references.

Cross-references

Sequence databases

BA000016 Genomic DNA. Translation: BAB80259.1.
RefSeqNP_561469.1.

3D structure databases

EntryMethodResolution (Å)ChainPositionsPDBsum
2V72X-ray2.25A42-180[»]
ModBaseSearch...

Protein family/group databases

CAZyCBM32. Carbohydrate-Binding Module Family 32.
CBM40. Carbohydrate-Binding Module Family 40.
GH33. Glycoside Hydrolase Family 33.

Genome annotation databases

GeneID988807.
GenomeReviewsGene locus CPE0553 in contig BA000016_GR.
KEGGcpe:CPE0553.
NMPDRfig|195102.1.peg.616.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ8XMY5.
OMAQ8XMY5. EVDEIAN.

Enzyme and pathway databases

BioCycCPER195102:CPE0553-MON.

Family and domain databases

InterProIPR002860. BNR.
IPR000421. Coagulation_factor_5/8-type_C.
IPR013320. ConA-like_subgrp.
IPR008957. Fibronectin_typ-III-like_fold.
IPR003961. FN_III.
IPR004124. Glyco_hydro_33_N.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
G3DSA:2.60.40.30. FN_III-like. 1 hit.
PfamPF02012. BNR. 2 hits.
PF00754. F5_F8_type_C. 1 hit.
PF00041. fn3. 1 hit.
PF02973. Sialidase. 1 hit.
[Graphical view]
SMARTSM00060. FN3. 1 hit.
[Graphical view]
PROSITEPS50022. FA58C_3. 1 hit.
PS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8XMY5_CLOPE
AccessionPrimary (citable) accession number: Q8XMY5
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: June 16, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information