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Protein
Submitted name:

Glycerol uptake facilitator protein

Gene

glpF

Organism
Clostridium perfringens (strain 13 / Type A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciCPER195102:GJFM-970-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator proteinImported
Gene namesi
Name:glpFImported
OrganismiClostridium perfringens (strain 13 / Type A)Imported
Taxonomic identifieri195102 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000000818 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2722HelicalSequence analysisAdd
BLAST
Transmembranei39 – 6224HelicalSequence analysisAdd
BLAST
Transmembranei82 – 10423HelicalSequence analysisAdd
BLAST
Transmembranei134 – 15623HelicalSequence analysisAdd
BLAST
Transmembranei162 – 18423HelicalSequence analysisAdd
BLAST
Transmembranei211 – 23323HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ8XLW4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiWNETKDA.
OrthoDBiEOG6P8TRZ.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8XLW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLLAELIG TMLLIILGDG VVANVVLKKT KGNSSGWIVI TTGWALAVAI
60 70 80 90 100
PAAIFTSVSG ALFNPALTIA LAIVGQFTWS QVIPYIIAQL LGAFLGAVVV
110 120 130 140 150
YITYYNHFEE TEDQNSKLGV FCTIPEIEDH KINFLTEFIG TFVLTFAVLG
160 170 180 190 200
IGAQNIDYGV KVIIIGCLIW AIGLSLGGPT GYAINPARDF GPRLAHFLLP
210 220 230
IPRKGSSKWE YAWIPIVAPI IGAICGALVY VNIF
Length:234
Mass (Da):25,041
Last modified:March 1, 2002 - v1
Checksum:iD644C4B7BDA82908
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000016 Genomic DNA. Translation: BAB80632.1.
RefSeqiWP_003463638.1. NC_003366.1.

Genome annotation databases

EnsemblBacteriaiBAB80632; BAB80632; BAB80632.
GeneIDi989186.
KEGGicpe:CPE0926.
PATRICi19495790. VBICloPer59675_0992.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000016 Genomic DNA. Translation: BAB80632.1.
RefSeqiWP_003463638.1. NC_003366.1.

3D structure databases

ProteinModelPortaliQ8XLW4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB80632; BAB80632; BAB80632.
GeneIDi989186.
KEGGicpe:CPE0926.
PATRICi19495790. VBICloPer59675_0992.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiWNETKDA.
OrthoDBiEOG6P8TRZ.

Enzyme and pathway databases

BioCyciCPER195102:GJFM-970-MONOMER.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 13 / Type AImported.

Entry informationi

Entry nameiQ8XLW4_CLOPE
AccessioniPrimary (citable) accession number: Q8XLW4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 11, 2015
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.