Q8XIQ6 (Q8XIQ6_CLOPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL BAB81764.1

Gene names

Ordered Locus Names:

CPE2058 EMBL BAB81764.1

Organism

Clostridium perfringens (strain 13 / Type A) [Complete proteome] [HAMAP] EMBL BAB81764.1

Taxonomic identifier

195102 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium perfringens

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8XIQ6 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 1B242027E4787DAE	FASTA	464	52,940
	10 20 30 40 50 60 MLFGKNELGS QFETPIFGTV ESNESIPKYE LAKKSIAPQV AYRLIKDDLL DEGNARQNLC 70 80 90 100 110 120 TFCQTYMDDE AVKLMAETLE KNAIDKSEYP QTTDLENRCV NILADLWHAP KDESFMGTST 130 140 150 160 170 180 VGSSEACMLG GMAMKFRWRN RAKALGMDVT SRKPNLVISS GYQVCWEKFC VYWDIEMRLV 190 200 210 220 230 240 PMDEEHMSIN VDKVLDYVDD YTIGVVGILG ITYTGKYDDI KALDKKLEEY NKTAKLTVPM 250 260 270 280 290 300 HIDAASGGMF APFIEPELEW DFRLKNVVSI STSGHKYGLV YPGIGWVLWR DKEYLPQELV 310 320 330 340 350 360 FDVSYLGGKI PTMAINFSRS ASQIIGQYYN FLRYGFEGYR QIHQRTKDVA MFLASELEKT 370 380 390 400 410 420 GLFQIYNNGE NLPIVCYKLR DDVNVDWTLY DLADRLLMKG WQVPAYPLPA DLQDTIIQRI 430 440 450 460 VCRADLSHNL AELYLRDLKA AIEDLNNARV LNQKSKTGVQ GFTH

References

[1]

"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater." Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H. Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 13 / Type A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000016 Genomic DNA. Translation: BAB81764.1.
RefSeq	NP_562974.1. NC_003366.1.
3D structure databases
HSSP	HSSP built from PDB template 1PMM based on UniProtKB P28302.
ProteinModelPortal	Q8XIQ6.
ModBase	Search...
Protein-protein interaction databases
STRING	195102.CPE2058.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAB81764; BAB81764; BAB81764.
GeneID	990373.
KEGG	cpe:CPE2058.
PATRIC	19498085. VBICloPer59675_2132.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK876864.
Enzyme and pathway databases
BioCyc	CPER195102:GJFM-2112-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...
Other
ChEMBL	CHEMBL1075168.

Entry information

Entry name

Q8XIQ6_CLOPE

Accession

Primary (citable) accession number: Q8XIQ6

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)