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Q8XIQ6 (Q8XIQ6_CLOPE) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CPE2058 EMBL BAB81764.1
OrganismClostridium perfringens (strain 13 / Type A) [Complete proteome] [HAMAP] EMBL BAB81764.1
Taxonomic identifier195102 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q8XIQ6 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 1B242027E4787DAE

FASTA46452,940
        10         20         30         40         50         60 
MLFGKNELGS QFETPIFGTV ESNESIPKYE LAKKSIAPQV AYRLIKDDLL DEGNARQNLC 

        70         80         90        100        110        120 
TFCQTYMDDE AVKLMAETLE KNAIDKSEYP QTTDLENRCV NILADLWHAP KDESFMGTST 

       130        140        150        160        170        180 
VGSSEACMLG GMAMKFRWRN RAKALGMDVT SRKPNLVISS GYQVCWEKFC VYWDIEMRLV 

       190        200        210        220        230        240 
PMDEEHMSIN VDKVLDYVDD YTIGVVGILG ITYTGKYDDI KALDKKLEEY NKTAKLTVPM 

       250        260        270        280        290        300 
HIDAASGGMF APFIEPELEW DFRLKNVVSI STSGHKYGLV YPGIGWVLWR DKEYLPQELV 

       310        320        330        340        350        360 
FDVSYLGGKI PTMAINFSRS ASQIIGQYYN FLRYGFEGYR QIHQRTKDVA MFLASELEKT 

       370        380        390        400        410        420 
GLFQIYNNGE NLPIVCYKLR DDVNVDWTLY DLADRLLMKG WQVPAYPLPA DLQDTIIQRI 

       430        440        450        460 
VCRADLSHNL AELYLRDLKA AIEDLNNARV LNQKSKTGVQ GFTH 

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References

[1]"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater."
Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H.
Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 13 / Type A.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000016 Genomic DNA. Translation: BAB81764.1.
RefSeqNP_562974.1. NC_003366.1.

3D structure databases

ProteinModelPortalQ8XIQ6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING195102.CPE2058.

Chemistry

ChEMBLCHEMBL1075168.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB81764; BAB81764; BAB81764.
GeneID990373.
KEGGcpe:CPE2058.
PATRIC19498085. VBICloPer59675_2132.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAKIHERTR.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycCPER195102:GJFM-2112-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ8XIQ6_CLOPE
AccessionPrimary (citable) accession number: Q8XIQ6
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)