Q8XIF9 (Q8XIF9_CLOPE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2`,3`-cyclic-nucleotide 2`-phosphodiesterase EMBL BAB81868.1

Gene names

Name:	cpdC EMBL BAB81868.1
Ordered Locus Names:	CPE2162

Organism

Clostridium perfringens [Complete proteome] [HAMAP]

Taxonomic identifier

1502 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	725 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 5'-nucleotidase family. RuleBase RU003467

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on ester bonds Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q8XIF9 [UniParc]. Last modified March 1, 2002. Version 1. Checksum: 64F45824ED9D3EDA	FASTA	725	81,511
	10 20 30 40 50 60 MRKLIKPLSV ATMMFLSLNL CFFNGKIVKG EEISNETKVT ILGTSDIHGR FVPWEYSSDT 70 80 90 100 110 120 ENKSGSLSQI STIVKKERNE NPNLILVDAG DSIQDNFVET FNKGPHQPMV LGMNKMKYDV 130 140 150 160 170 180 WEMGNHEFNF GLDVLKHVTS QFEGKVLAGN IYNDDGTRFM DGYTIIERDG IKIGIIGMDT 190 200 210 220 230 240 PMIKEFEKPY NIKGIEFRDP VKETKKIIKE LDGKVDAMIG VMHMGLDNEN AISNTGVTDI 250 260 270 280 290 300 ANQCPELTAI VGGHMHKLVK NEVVNGVIIT EPGKYGQAVS KIDLTFKKEN GKNVLKNKNA 310 320 330 340 350 360 DTISVANVES DKEIEDLLKP FHEELRKDAN SVIGRLEGVN MVDEDYIKGI PTIHIEDTPL 370 380 390 400 410 420 IDFFHEVGKY YSKADVIALS IDNDKAKLNV GDIKKKDIAY NYRYTGGEIS VYEVTGKDLK 430 440 450 460 470 480 KYMEWAAGYF NTLNPGDITP SFNPKRRASK YSTNDMFGGI TYKIDLREKE GNRIKDVKYK 490 500 510 520 530 540 DGRELKDTDV LKLGMNSYRL GQLQGKGGIF EGKEFKKLWD SKTAYGEEEG TIRNLAIDYI 550 560 570 580 590 600 KNVKNGLINT KKQNNWCLLG IDPNSENYKK VRDLVNSGEL KIPTSEDGKY TNIASINEKD 610 620 630 640 650 660 LPSDNNTSKE NEENINLDSI NNKNNNKDQE VNEESKKDVP KVEENIEKQK NNKENNSNGD 670 680 690 700 710 720 NTLVKEDSKS KEVNEKNNEQ NNIEEVSKKE NKLPNTGSPI GAEAMSQIGM LLLGAGVILK KKNKK

References

[1]

"Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater." Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T., Ogasawara N., Hattori M., Kuhara S., Hayashi H. Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002) [PubMed: 11792842] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 13 / Type A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000016 Genomic DNA. Translation: BAB81868.1.
RefSeq	NP_563078.1. NC_003366.1.
3D structure databases
HSSP	HSSP built from PDB template 2USH based on UniProtKB P07024.
ProteinModelPortal	Q8XIF9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	990477.
GenomeReviews	Gene locus CPE2162 in contig BA000016_GR.
KEGG	cpe:CPE2162.
NMPDR	fig|195102.1.peg.2225.
PATRIC	19498291. VBICloPer59675_2235.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG682647.
OMA	IGIIGMD.
PhylomeDB	Q8XIF9.
ProtClustDB	CLSK874793.
Family and domain databases
InterPro	IPR008334. 5'-Nucleotdase_C. IPR006146. 5'-Nucleotdase_CS. IPR006179. 5_nucleotidase/apyrase. IPR019931. LPXTG-motif_cell_wall_anchor. IPR004843. Metallo_PEstase_dom. [Graphical view]
Gene3D	G3DSA:3.90.780.10. 5'-Nucleotdase_C. 1 hit.
KO	K01119.
PANTHER	PTHR11575. 5_nucleotidase. 1 hit.
Pfam	PF02872. 5_nucleotid_C. 1 hit. PF00149. Metallophos. 1 hit. [Graphical view]
PRINTS	PR01607. APYRASEFAMLY.
SUPFAM	SSF55816. 5'-Nucleotdase_C. 1 hit.
TIGRFAMs	TIGR01167. LPXTG_anchor. 1 hit.
PROSITE	PS00786. 5_NUCLEOTIDASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q8XIF9_CLOPE

Accession

Primary (citable) accession number: Q8XIF9

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2002
Last sequence update:	March 1, 2002
Last modified:	December 14, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)