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Protein
Submitted name:

Hydroxymethylpyrimidine kinase

Gene

thiD

Organism
Escherichia coli O157:H7
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotationImported, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciECOL386585:GJFA-2866-MONOMER.
ECOO157:THID-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Hydroxymethylpyrimidine kinaseImported (EC:2.7.4.7Imported)
Submitted name:
Phosphomethylpyrimidine kinaseImported
Gene namesi
Name:thiDImported
Ordered Locus Names:ECs2906Imported, Z3267Imported
ORF Names:AO055_14200Imported
OrganismiEscherichia coli O157:H7Imported
Taxonomic identifieri83334 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000558 Componenti: Chromosome
  • UP000002519 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi155864.Z3267.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 260248Phos_pyr_kinInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105DWF. Bacteria.
COG0351. LUCA.
HOGENOMiHOG000225275.
KOiK00941.
OMAiFAFHCVH.
OrthoDBiEOG6XWV53.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00097. HMP-P_kinase. 1 hit.

Sequencei

Sequence statusi: Complete.

Q8X7G5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRINALTIA GTDPSGGAGI QADLKTFSAL GAYGCSVITA LVAQNTRGVQ
60 70 80 90 100
SVYRIEPDFV AAQLDSVFSD VRIDTTKIGM LAETDIVEAV AERLQRYQIQ
110 120 130 140 150
NVVLDTVMLA KSGDPLLSPS AVATLRSRLL PQVSLITPNL PEAAALLDAP
160 170 180 190 200
HARTEQEMLE QGRALLAMGC GAVLMKGGHL DDEQSPDWLF TREGEQRFTA
210 220 230 240 250
PRIMTKNTHG TGCTLSAALA ALRPRHTNWA DTVQEAKSWL SSALAQADTL
260
EVGHGIGPVH HFHAWW
Length:266
Mass (Da):28,618
Last modified:March 1, 2002 - v1
Checksum:iA8E31593E52196F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG57160.1.
CP012802 Genomic DNA. Translation: ALH91342.1.
BA000007 Genomic DNA. Translation: BAB36329.1.
PIRiB90992.
D85837.
RefSeqiNP_310933.1. NC_002695.1.
WP_000822268.1. NZ_LMXL01000082.1.

Genome annotation databases

EnsemblBacteriaiAAG57160; AAG57160; Z3267.
GeneIDi916609.
KEGGiece:Z3267.
ecs:ECs2906.
PATRICi18355195. VBIEscCol44059_2798.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE005174 Genomic DNA. Translation: AAG57160.1.
CP012802 Genomic DNA. Translation: ALH91342.1.
BA000007 Genomic DNA. Translation: BAB36329.1.
PIRiB90992.
D85837.
RefSeqiNP_310933.1. NC_002695.1.
WP_000822268.1. NZ_LMXL01000082.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi155864.Z3267.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG57160; AAG57160; Z3267.
GeneIDi916609.
KEGGiece:Z3267.
ecs:ECs2906.
PATRICi18355195. VBIEscCol44059_2798.

Phylogenomic databases

eggNOGiENOG4105DWF. Bacteria.
COG0351. LUCA.
HOGENOMiHOG000225275.
KOiK00941.
OMAiFAFHCVH.
OrthoDBiEOG6XWV53.

Enzyme and pathway databases

BioCyciECOL386585:GJFA-2866-MONOMER.
ECOO157:THID-MONOMER.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00097. HMP-P_kinase. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12."
    Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K., Han C., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T., Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T.
    , Kuhara S., Shiba T., Hattori M., Shinagawa H.
    DNA Res. 8:11-22(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: O157:H7 / Sakai / RIMD 0509952 / EHECImported and SakaiImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: EDL933Imported and O157:H7 / EDL933 / ATCC 700927 / EHECImported.
  3. "Draft genome sequence of three European lab-derivates from the enterohemorrhagic E. coli O157:H7 strain EDL933, including two plasmids."
    Fellner L., Huptas C., Simon S., Krementowski A., Scherer S., Neuhaus K.
    Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: WS4202Imported.

Entry informationi

Entry nameiQ8X7G5_ECO57
AccessioniPrimary (citable) accession number: Q8X7G5
Secondary accession number(s): Q7ACK6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: April 13, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.