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Unreviewed, UniProtKB/TrEMBL Q8X268 (Q8X268_PYRKO)

Last modified June 16, 2009. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Cyclodextrin glucanotransferase EMBL BAB78538.1
Submitted name:
    Cyclodextrin glucanotransferase, GH13 family EMBL BAD86361.1
Gene names
Name: Tk-cgt EMBL BAB78538.1
Ordered Locus Names: TK2172
OrganismPyrococcus kodakaraensis (Thermococcus kodakaraensis) [Complete proteome] [HAMAP] EMBL BAB78538.1
Taxonomic identifier69014 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaeThermococcus

Protein attributes

Sequence length713 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q8X268-1 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 964CB0432F73AFA9

FASTA71379,598
        10         20         30         40         50         60 
MGRLVSVVLI VLLLTPIASA WEVPERGIIY QVMVDRFYDG NTSNNEPFYD PTHSNYRLYW 

        70         80         90        100        110        120 
GGDLEGLIEK LDYIKSLGVS MIWVSPLNDN INSLAYGSAP YHGYWTRDYK RIEEHFGGWE 

       130        140        150        160        170        180 
DFRRLVKEAK KRGICIIVDY VPNHSNPVNY GEYGALYDNG TFLTDYFKDT KNAEVNPITG 

       190        200        210        220        230        240 
IRENVYHHNG NIYTWSGIPL KYANLYGLAD FNQLNPWVDS YLTEGAMLFV DSGACGLRID 

       250        260        270        280        290        300 
AVKHMELGWL ETFYLRLYSK GPLFIYGEYF TPSLQKGDDL YEFYRYSNVS PVLSIPIRED 

       310        320        330        340        350        360 
IVRIFAFFGG LDKLSEELGD YYSHFVYPTK AVNFLDSHDL VRFLNAGDRK DEIQRFHMAL 

       370        380        390        400        410        420 
ALTLTLPGIP VIYYGDESYL VSKDGKGDPY NRPTMVFDNT TEASRIIRTL GGLRKTNDAL 

       430        440        450        460        470        480 
VFGDFMTVTA SYETWAFERT FGNHSLLVVM NKGPAVNLTF SVDWPDGNYR DALYGGEMVV 

       490        500        510        520        530        540 
SGGKASVYLP RDSVYVFHIE GEQKKPLIGS ITPYAARPGQ EIVIGGAGFG KGGKVIIGGR 

       550        560        570        580        590        600 
EAKVLSWEDG KIVVEVPRLE TSAAWVNVTV VSDGGRSPPR PLRYYSGNDV PALIALNASL 

       610        620        630        640        650        660 
VGEVSGTLWL SGDLPELGEP RPLLKSSMGY YFTVAPLPEG VPFSVRLYEG KAWGALRPLN 

       670        680        690        700        710 
LTLYGVGNRT VTLTEKPPGV SEGQKAGQKD VALYALSVVM IAALIAVVWK RKG 

« Hide

References

« Hide 'large scale' references
[1]"Characterization of an archaeal cyclodextrin glucanotransferase with a novel C-terminal domain."
Rashid N., Cornista J., Ezaki S., Fukui T., Atomi H., Imanaka T.
J. Bacteriol. 184:777-784(2002) [PubMed: 11790748] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KOD1 EMBL BAB78538.1.
[2]"Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes."
Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.
Genome Res. 15:352-363(2005) [PubMed: 15710748] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KOD1.

Cross-references

Sequence databases

AB072372 Genomic DNA. Translation: BAB78538.1.
AP006878 Genomic DNA. Translation: BAD86361.1.
RefSeqYP_184585.1.

3D structure databases

HSSPHSSP built from PDB template 1QHP based on UniProtKB P19531.
ModBaseSearch...

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Genome annotation databases

GeneID3235464.
GenomeReviewsGene locus TK2172 in contig AP006878_GR.
KEGGtko:TK2172.
NMPDRfig|69014.3.peg.2173.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ8X268.
OMAQ8X268. NINSLAY.

Enzyme and pathway databases

BioCycTKOD69014:TK2172-MON.
BRENDA2.4.1.19. 281040.

Family and domain databases

InterProIPR006048. A-amylase_b_C.
IPR006047. Glyco_hydro_13_cat.
IPR006589. Glyco_hydro_13_sub_cat.
IPR013781. Glyco_hydro_sg_catalytic.
IPR013783. Ig-like_fold.
IPR002909. IPT_TIG_rcpt.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF01833. TIG. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ8X268_PYRKO
AccessionPrimary (citable) accession number: Q8X268
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: June 16, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information