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Protein
Submitted name:

Agglutinin

Gene
N/A
Organism
Marasmius oreades
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei23 – 231N-acetyl-D-glucosamineCombined sources
Binding sitei75 – 751N-acetyl-D-glucosamineCombined sources
Metal bindingi183 – 1831CalciumCombined sources
Metal bindingi211 – 2111Calcium; via carbonyl oxygenCombined sources
Metal bindingi214 – 2141CalciumCombined sources
Metal bindingi216 – 2161CalciumCombined sources
Metal bindingi217 – 2171CalciumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
AgglutininImported
OrganismiMarasmius oreadesImported
Taxonomic identifieri181124 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesMarasmiaceaeMarasmius

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2IHOX-ray2.41A1-293[»]
3EF2X-ray1.80A/B/C/D1-293[»]
5D61X-ray1.60A1-293[»]
5D62X-ray1.70A1-293[»]
5D63X-ray1.65A1-293[»]
ProteinModelPortaliQ8X123.
SMRiQ8X123. Positions 2-293.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8X123.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 154136Ricin B-type lectinInterPro annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni20 – 234Galactose bindingCombined sources
Regioni35 – 384Galactose bindingCombined sources
Regioni43 – 453Galactose bindingCombined sources
Regioni72 – 754Galactose bindingCombined sources
Regioni87 – 882Galactose bindingCombined sources
Regioni95 – 973Galactose bindingCombined sources

Family and domain databases

InterProiIPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF14200. RicinB_lectin_2. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8X123-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLRRGIYHI ENAGVPSAID LKDGSSSDGT PIVGWQFTPD TINWHQLWLA
60 70 80 90 100
EPIPNVADTF TLCNLFSGTY MDLYNGSSEA GTAVNGWQGT AFTTNPHQLW
110 120 130 140 150
TIKKSSDGTS YKIQNYGSKT FVDLVNGDSS DGAKIAGWTG TWDEGNPHQK
160 170 180 190 200
WYFNRMSVSS AEAQAAIARN PHIHGTYRGY ILDGEYLVLP NATFTQIWKD
210 220 230 240 250
SGLPGSKWRE QIYDCDDFAI AMKAAVGKWG ADSWKANGFA IFCGVMLGVN
260 270 280 290
KAGDAAHAYN FTLTKDHADI VFFEPQNGGY LNDIGYDSYM AFY
Length:293
Mass (Da):32,301
Last modified:March 1, 2002 - v1
Checksum:iAC67E1420EB5700B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066013 mRNA. Translation: AAL47680.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066013 mRNA. Translation: AAL47680.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2IHOX-ray2.41A1-293[»]
3EF2X-ray1.80A/B/C/D1-293[»]
5D61X-ray1.60A1-293[»]
5D62X-ray1.70A1-293[»]
5D63X-ray1.65A1-293[»]
ProteinModelPortaliQ8X123.
SMRiQ8X123. Positions 2-293.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ8X123.

Family and domain databases

InterProiIPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF14200. RicinB_lectin_2. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8X123_9AGAR
AccessioniPrimary (citable) accession number: Q8X123
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: May 11, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.