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Protein
Submitted name:

Agglutinin

Gene
N/A
Organism
Marasmius oreades
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei23N-acetyl-D-glucosamineCombined sources1
Binding sitei75N-acetyl-D-glucosamineCombined sources1
Metal bindingi183CalciumCombined sources1
Metal bindingi211Calcium; via carbonyl oxygenCombined sources1
Metal bindingi214CalciumCombined sources1
Metal bindingi216CalciumCombined sources1
Metal bindingi217CalciumCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
AgglutininImported
OrganismiMarasmius oreadesImported
Taxonomic identifieri181124 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesMarasmiaceaeMarasmius

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IHOX-ray2.41A1-293[»]
3EF2X-ray1.80A/B/C/D1-293[»]
5D61X-ray1.60A1-293[»]
5D62X-ray1.70A1-293[»]
5D63X-ray1.65A1-293[»]
ProteinModelPortaliQ8X123.
SMRiQ8X123.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8X123.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 154Ricin B-type lectinInterPro annotationAdd BLAST136

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni20 – 23Galactose bindingCombined sources4
Regioni35 – 38Galactose bindingCombined sources4
Regioni43 – 45Galactose bindingCombined sources3
Regioni72 – 75Galactose bindingCombined sources4
Regioni87 – 88Galactose bindingCombined sources2
Regioni95 – 97Galactose bindingCombined sources3

Family and domain databases

InterProiIPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF14200. RicinB_lectin_2. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q8X123-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLRRGIYHI ENAGVPSAID LKDGSSSDGT PIVGWQFTPD TINWHQLWLA
60 70 80 90 100
EPIPNVADTF TLCNLFSGTY MDLYNGSSEA GTAVNGWQGT AFTTNPHQLW
110 120 130 140 150
TIKKSSDGTS YKIQNYGSKT FVDLVNGDSS DGAKIAGWTG TWDEGNPHQK
160 170 180 190 200
WYFNRMSVSS AEAQAAIARN PHIHGTYRGY ILDGEYLVLP NATFTQIWKD
210 220 230 240 250
SGLPGSKWRE QIYDCDDFAI AMKAAVGKWG ADSWKANGFA IFCGVMLGVN
260 270 280 290
KAGDAAHAYN FTLTKDHADI VFFEPQNGGY LNDIGYDSYM AFY
Length:293
Mass (Da):32,301
Last modified:March 1, 2002 - v1
Checksum:iAC67E1420EB5700B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066013 mRNA. Translation: AAL47680.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066013 mRNA. Translation: AAL47680.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2IHOX-ray2.41A1-293[»]
3EF2X-ray1.80A/B/C/D1-293[»]
5D61X-ray1.60A1-293[»]
5D62X-ray1.70A1-293[»]
5D63X-ray1.65A1-293[»]
ProteinModelPortaliQ8X123.
SMRiQ8X123.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiQ8X123.

Family and domain databases

InterProiIPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF14200. RicinB_lectin_2. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
PROSITEiPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8X123_9AGAR
AccessioniPrimary (citable) accession number: Q8X123
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 2, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.