Q8WZM0 (GCN5_YARLI) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 63.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Histone acetyltransferase GCN5 EC=2.3.1.48 | ||||
| Gene names |
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| Organism | Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) | ||||
| Taxonomic identifier | 284591 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › Yarrowia |
Protein attributes
| Sequence length | 464 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Acetylates histone H2B to form H2BK11ac and H2BK16ac, histone H3 to form H3K14ac, with a lower preference histone H4 to form H4K8ac and H4K16ac, and contributes to H2A.Z acetylation. Acetylation of histones gives a specific tag for epigenetic transcription activation By similarity. |
| Catalytic activity | Acetyl-CoA + [histone] = CoA + acetyl-[histone]. |
| Subcellular location | Nucleus By similarity. |
| Sequence similarities | Belongs to the GCN5 family. Contains 1 bromo domain. Contains 1 N-acetyltransferase domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Cellular component | Nucleus |
| Domain | Bromodomain |
| Molecular function | Activator Acyltransferase Chromatin regulator Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | histone acetyltransferase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 464 | 464 | Histone acetyltransferase GCN5 | PRO_0000211200 | |||||
Regions | |||||||||
| Domain | 127 – 282 | 156 | N-acetyltransferase | ||||||
| Domain | 369 – 439 | 71 | Bromo | ||||||
| Compositional bias | 31 – 128 | 98 | Glu-rich | ||||||
Sites | |||||||||
| Site | 200 | 1 | Important for catalytic activity By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Isolation and characterization of the GCN5 gene of Yarrowia lipolytica." Gonzalez-Prieto J., Dominguez-Olavarri A., Ruiz-Herrera J. Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: INAG 35668. |
| [2] | "Genome evolution in yeasts." Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S. Souciet J.-L.Nature 430:35-44(2004) [PubMed: 15229592] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIB 122 / E 150. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AJ237940 Genomic DNA. Translation: CAC80210.1. CR382131 Genomic DNA. Translation: CAG79052.1. |
| RefSeq | XP_503473.1. XM_503473.1. |
3D structure databases | |
| ProteinModelPortal | Q8WZM0. |
| SMR | Q8WZM0. Positions 126-289, 354-463. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q8WZM0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 2912645. |
| GenomeReviews | Gene locus YALI0E02772g in contig CR382131_GR. |
| KEGG | yli:YALI0E02772g. |
Phylogenomic databases | |
| eggNOG | fuNOG05844. |
| HOGENOM | HBG749648. |
| OMA | LVYDRSH. |
| OrthoDB | EOG412QF2. |
Family and domain databases | |
| InterPro | IPR000182. AcTrfase_GCN5-related_dom. IPR016181. Acyl_CoA_acyltransferase. IPR001487. Bromodomain. IPR018359. Bromodomain_CS. [Graphical view] |
| Gene3D | G3DSA:3.40.630.30. Acyl_CoA_acyltransferase. 1 hit. G3DSA:1.20.920.10. Bromodomain. 1 hit. |
| KO | K06062. |
| Pfam | PF00583. Acetyltransf_1. 1 hit. PF00439. Bromodomain. 1 hit. [Graphical view] |
| PRINTS | PR00503. BROMODOMAIN. |
| SMART | SM00297. BROMO. 1 hit. [Graphical view] |
| SUPFAM | SSF55729. Acyl_CoA_acyltransferase. 1 hit. SSF47370. Bromodomain. 1 hit. |
| PROSITE | PS00633. BROMODOMAIN_1. 1 hit. PS50014. BROMODOMAIN_2. 1 hit. PS51186. GNAT. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | GCN5_YARLI | ||||||||
| Accession | Primary (citable) accession number: Q8WZM0 Secondary accession number(s): Q6C789 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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