Q8WZ74 (CTTB2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 81.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Cortactin-binding protein 2 Short name=CortBP2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1663 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Regulates the dendritic spine distribution of CTTN/cortactin in hippocampal neurons, thus controls dendritic spinogenesis and dendritic spine maintenance By similarity. |
| Subunit structure | Interacts with CTTN/cortactin SH3 domain By similarity. Interacts with STRN, STRN4/zinedin and MOB4/phocein; this interaction may regulate dendritic spine distribution of STRN and STRN4 in hippocampal neurons By similarity. Activation of glutamate receptors weakens the interaction with STRN and STRN4 By similarity. |
| Subcellular location | Cytoplasm › cell cortex By similarity. Cell projection › dendritic spine By similarity. Note: Remains associated with dendritic spines even after glutamate stimulation By similarity. |
| Tissue specificity | Highest expression in brain. Also expressed in kidney, pancreas, lung, heart, liver, skeletal muscle and placenta. Ref.1 |
| Sequence similarities | Contains 6 ANK repeats. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cell projection Cytoplasm |
| Coding sequence diversity | Polymorphism |
| Domain | ANK repeat Coiled coil Repeat |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | brain development Inferred from electronic annotation. Source: Compara |
| Cellular_component | synaptic vesicle Inferred from electronic annotation. Source: Compara |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1663 | 1663 | Cortactin-binding protein 2 | PRO_0000227002 | |||||
Regions | |||||||||
| Repeat | 709 – 739 | 31 | ANK 1 | ||||||
| Repeat | 743 – 772 | 30 | ANK 2 | ||||||
| Repeat | 776 – 805 | 30 | ANK 3 | ||||||
| Repeat | 809 – 838 | 30 | ANK 4 | ||||||
| Repeat | 842 – 871 | 30 | ANK 5 | ||||||
| Repeat | 912 – 942 | 31 | ANK 6 | ||||||
| Coiled coil | 119 – 276 | 158 | Potential | ||||||
| Compositional bias | 371 – 561 | 191 | Pro-rich | ||||||
Amino acid modifications | |||||||||
| Modified residue | 1524 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Natural variant | 1148 | 1 | Q → K. Corresponds to variant rs10274022 [ dbSNP | Ensembl ]. | VAR_048294 | |||||
| Natural variant | 1213 | 1 | L → V. Ref.1 | VAR_025535 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification of the human cortactin-binding protein-2 gene from the autism candidate region at 7q31." Cheung J., Petek E., Nakabayashi K., Tsui L.-C., Vincent J.B., Scherer S.W. Genomics 78:7-11(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT VAL-1213, TISSUE SPECIFICITY. |
| [2] | Stacy R., Subramanian S., Deodato C., Burkhardt P., Song Y., Paddock M., Chang J., Zhou Y., Haugen E., Waring D., Chapman P., Hayden H., Levy R., Wu Z., Rouse G., James R., Phelps K., Olson M.V., Kaul R. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The DNA sequence of human chromosome 7." Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L. Wilson R.K.Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Placenta. |
| [5] | "Prediction of the coding sequences of unidentified human genes. XIX. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Kikuno R., Hattori A., Kondo Y., Okumura K., Ohara O. DNA Res. 7:347-355(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2-1663. |
| [6] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1524, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF377960 mRNA. Translation: AAL32176.1. DQ354388 Genomic DNA. Translation: ABC79049.1. DQ354389 Genomic DNA. Translation: ABC79051.1. DQ354390 Genomic DNA. Translation: ABC79053.1. DQ354391 Genomic DNA. Translation: ABC79055.1. DQ356257 Genomic DNA. Translation: ABC87052.1. DQ356259 Genomic DNA. Translation: ABC87056.1. DQ356260 Genomic DNA. Translation: ABC87058.1. DQ356261 Genomic DNA. Translation: ABC87060.1. DQ356262 Genomic DNA. Translation: ABC87062.1. DQ356264 Genomic DNA. Translation: ABC87066.1. AC004240 Genomic DNA. Translation: AAC04501.2. BC106000 mRNA. Translation: AAI06001.1. AB051545 mRNA. Translation: BAB21849.1. |
| IPI | IPI00103869. |
| RefSeq | NP_219499.1. NM_033427.2. |
| UniGene | Hs.592285. |
3D structure databases | |
| ProteinModelPortal | Q8WZ74. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q8WZ74. 25 interactions. |
| STRING | 9606.ENSP00000160373. |
PTM databases | |
| PhosphoSite | Q8WZ74. |
Polymorphism databases | |
| DMDM | 74751641. |
Proteomic databases | |
| PaxDb | Q8WZ74. |
| PRIDE | Q8WZ74. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000160373; ENSP00000160373; ENSG00000077063. |
| GeneID | 83992. |
| KEGG | hsa:83992. |
| UCSC | uc003vjf.3. human. |
Organism-specific databases | |
| CTD | 83992. |
| GeneCards | GC07M117350. |
| HGNC | HGNC:15679. CTTNBP2. |
| HPA | CAB009151. |
| MIM | 609772. gene. |
| neXtProt | NX_Q8WZ74. |
| PharmGKB | PA26774. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG0666. |
| HOGENOM | HOG000112055. |
| HOVERGEN | HBG073485. |
| InParanoid | Q8WZ74. |
| OMA | SQALTNH. |
| OrthoDB | EOG4W9J3Q. |
| PhylomeDB | Q8WZ74. |
Gene expression databases | |
| ArrayExpress | Q8WZ74. |
| Bgee | Q8WZ74. |
| CleanEx | HS_CTTNBP2. |
| Genevestigator | Q8WZ74. |
| GermOnline | ENSG00000077063. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.25.40.20. 2 hits. |
| InterPro | IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. IPR019131. Cortactin-binding_p2_N. [Graphical view] |
| Pfam | PF00023. Ank. 1 hit. PF12796. Ank_2. 1 hit. PF09727. CortBP2. 2 hits. [Graphical view] |
| SMART | SM00248. ANK. 6 hits. [Graphical view] |
| SUPFAM | SSF48403. ANK. 1 hit. |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 4 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 83992. |
| NextBio | 73152. |
| SOURCE | Search... |
Entry information
| Entry name | CTTB2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q8WZ74 Secondary accession number(s): O43389, Q7LG11, Q9C0A5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 7 Human chromosome 7: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
