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Q8WY41 (NANO1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nanos homolog 1

Short name=NOS-1
Alternative name(s):
EC_Rep1a
Gene names
Name:NANOS1
Synonyms:NOS1
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length292 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May act as a translational repressor which regulates translation of specific mRNAs by forming a complex with PUM2 that associates with the 3'-UTR of mRNA targets. Capable of interfering with the proadhesive and anti-invasive functions of E-cadherin. Up-regulates the production of MMP14 to promote tumor cell invasion. Ref.2 Ref.4

Subunit structure

Interacts with PUM2, SNAPIN and CTNNB1. Interacts (via N-terminal region) with CTNND1. Ref.1 Ref.2 Ref.5

Subcellular location

Cytoplasmperinuclear region. Cytoplasm. Note: Co-localizes with SNAPIN and PUM2 in the perinuclear region of germ cells. Ref.1 Ref.2 Ref.5

Tissue specificity

Testis and ovary (at protein level). Predominantly expressed in testis. Specifically expressed during germline development. In adult tissues, it is mainly expressed in spermatogonia, the stem cells of the germline. Also expressed during meiosis in spermatocytes. Not present in late, post-meiotic stage germ cells. Expressed in fetal ovaries, while it is weakly or not expressed in mature postmeiotic oocytes, suggesting that it may be expressed in premeiotic female germ cells. Expressed at high levels only in the E-cadherin deficient cell lines. Highly expressed in lung carcinomas and mostly detected in invasive tumor cells and its expression correlates with tumor aggressiveness. Ref.1 Ref.2 Ref.4 Ref.5 Ref.6

Developmental stage

Fetal ovary and fetal testis (at protein level). Ref.6

Induction

Down-regulated by E-cadherin. Ref.2

Domain

The Nanos-type zinc finger is composed of two C2HC motifs, each motif binding one molecule of zinc. It is essential for the translation repression activity of the protein By similarity.

The N-terminal region and C-terminal zinc-finger RNA-binding domain are both necessary for interaction with SNAPIN.

Sequence similarities

Belongs to the nanos family.

Contains 1 nanos-type zinc finger.

Ontologies

Keywords
   Biological processTranslation regulation
   Cellular componentCytoplasm
   DomainZinc-finger
   LigandMetal-binding
RNA-binding
Zinc
   Molecular functionRepressor
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processepithelial cell migration

Inferred from direct assay Ref.2. Source: UniProtKB

   Cellular componentperinuclear region of cytoplasm

Inferred from direct assay Ref.2Ref.5. Source: UniProtKB

   Molecular functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

protein binding

Inferred from physical interaction Ref.2Ref.5. Source: UniProtKB

translation repressor activity

Inferred from sequence or structural similarity. Source: UniProtKB

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 292292Nanos homolog 1
PRO_0000207685

Regions

Zinc finger213 – 26755Nanos-type
Region40 – 5617Essential for its translational repressor activity By similarity
Motif214 – 24128C2HC 1
Motif249 – 26517C2HC 2
Compositional bias136 – 20469Ala-rich

Sequences

Sequence LengthMass (Da)Tools
Q8WY41 [UniParc].

Last modified February 2, 2004. Version 2.
Checksum: 1E41AAE68992CDD7

FASTA29230,230
        10         20         30         40         50         60 
MEAFPWAPRS PRRGRAPPPM ALVPSARYVS APGPAHPQPF SSWNDYLGLA TLITKAVDGE 

        70         80         90        100        110        120 
PRFGCARGGN GGGGSPPSSS SSSCCSPHTG AGPGALGPAL GPPDYDEDDD DDSDEPGSRG 

       130        140        150        160        170        180 
RYLGSALELR ALELCAGPAE AGLLEERFAE LSPFAGRAAA VLLGCAPAAA AAATTTSEAT 

       190        200        210        220        230        240 
PREERAPAWA AEPRLHAASG AAAARLLKPE LQVCVFCRNN KEAMALYTTH ILKGPDGRVL 

       250        260        270        280        290 
CPVLRRYTCP LCGASGDNAH TIKYCPLSKV PPPPARPPPR SARDGPPGKK LR 

« Hide

References

« Hide 'large scale' references
[1]"Conservation of a Pumilio-Nanos complex from Drosophila germ plasm to human germ cells."
Jaruzelska J., Kotecki M., Kusz K., Spik A., Firpo M., Reijo Pera R.A.
Dev. Genes Evol. 213:120-126(2003) [PubMed: 12690449] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, TISSUE SPECIFICITY, INTERACTION WITH PUM2.
Tissue: Testis.
[2]"E-cadherin regulates human Nanos1, which interacts with p120ctn and induces tumor cell migration and invasion."
Strumane K., Bonnomet A., Stove C., Vandenbroucke R., Nawrocki-Raby B., Bruyneel E., Mareel M., Birembaut P., Berx G., van Roy F.
Cancer Res. 66:10007-10015(2006) [PubMed: 17047063] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, INDUCTION, INTERACTION WITH CTNND1 AND CTNNB1, TISSUE SPECIFICITY.
[3]"The DNA sequence and comparative analysis of human chromosome 10."
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. expand/collapse author list , Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.
Nature 429:375-381(2004) [PubMed: 15164054] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]"The E-cadherin-repressed hNanos1 gene induces tumor cell invasion by upregulating MT1-MMP expression."
Bonnomet A., Polette M., Strumane K., Gilles C., Dalstein V., Kileztky C., Berx G., van Roy F., Birembaut P., Nawrocki-Raby B.
Oncogene 27:3692-3699(2008) [PubMed: 18223680] [Abstract]
Cited for: FUNCTION, TISSUE SPECIFICITY.
[5]"The SNARE-associated component SNAPIN binds PUMILIO2 and NANOS1 proteins in human male germ cells."
Ginter-Matuszewska B., Spik A., Rembiszewska A., Koyias C., Kupryjanczyk J., Jaruzelska J.
Mol. Hum. Reprod. 15:173-179(2009) [PubMed: 19168546] [Abstract]
Cited for: SUBCELLULAR LOCATION, TISSUE SPECIFICITY, INTERACTION WITH PUM2 AND SNAPIN.
[6]"NANOS3 function in human germ cell development."
Julaton V.T., Reijo Pera R.A.
Hum. Mol. Genet. 20:2238-2250(2011) [PubMed: 21421998] [Abstract]
Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF275269 mRNA. Translation: AAL36982.2.
AF458985 mRNA. Translation: AAQ04765.1.
AL157788 Genomic DNA. Translation: CAI14718.1.
IPIIPI00397510.
RefSeqNP_955631.1. NM_199461.2.
UniGeneHs.591918.

3D structure databases

ProteinModelPortalQ8WY41.
SMRQ8WY41. Positions 212-266.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ8WY41.

Polymorphism databases

DMDM41688589.

Proteomic databases

PRIDEQ8WY41.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000425699; ENSP00000393275; ENSG00000188613.
GeneID340719.
KEGGhsa:340719.
UCSCuc009xzf.1. human.

Organism-specific databases

CTD340719.
GeneCardsGC10P120779.
H-InvDBHIX0035319.
HGNCHGNC:23044. NANOS1.
HPACAB012219.
MIM608226. gene.
neXtProtNX_Q8WY41.
PharmGKBPA134876543.
GenAtlasSearch...

Phylogenomic databases

GeneTreeENSGT00390000005985.
HOGENOMHBG125811.
HOVERGENHBG052574.
InParanoidQ8WY41.
OMAMEAFPWA.
PhylomeDBQ8WY41.

Gene expression databases

ArrayExpressQ8WY41.
BgeeQ8WY41.
CleanExHS_NANOS1.
HS_NOS1.
GenevestigatorQ8WY41.
GermOnlineENSG00000188613. Homo sapiens.

Family and domain databases

InterProIPR008705. Nanos/Xcar2.
IPR024161. Znf_nanos-typ.
[Graphical view]
PANTHERPTHR12887. Znf_Nanos. 1 hit.
PfamPF05741. zf-nanos. 1 hit.
[Graphical view]
PROSITEPS51522. ZF_NANOS. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio98006.
SOURCESearch...

Entry information

Entry nameNANO1_HUMAN
AccessionPrimary (citable) accession number: Q8WY41
Entry history
Integrated into UniProtKB/Swiss-Prot: February 2, 2004
Last sequence update: February 2, 2004
Last modified: January 25, 2012
This is version 75 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 10

Human chromosome 10: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families