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Q8WWK9 (CKAP2_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 100. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Cytoskeleton-associated protein 2
Alternative name(s):
CTCL tumor antigen se20-10
Tumor- and microtubule-associated protein
Gene names
Name:CKAP2
Synonyms:LB1, TMAP
OrganismHomo sapiens (Human) [Reference proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length683 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Possesses microtubule stabilizing properties. Involved in regulating aneuploidy, cell cycling, and cell death in a p53/TP53-dependent manner By similarity. UniProtKB Q3V1H1

Subunit structure

Associates with alpha- and beta-tubulins By similarity.

Subcellular location

Cytoplasmcytoskeleton. Cytoplasmcytoskeletonspindle. Cytoplasmcytoskeletonspindle pole. Note: Contrary to the ectopically expressed protein, endogenous CKAP2 does not colocalize with microtubules in G1, S and early G2. At late G2 and prophase after separation of duplicated centrosomes, colocalizes with gamma-tubulin and centrosome-proximal microtubules. From prometaphase through anaphase B, colocalizes with mitotic spindle poles and spindle microtubules. During cytokinesis, absent from midbody microtubules. Ref.1 Ref.3 Ref.10

Tissue specificity

Abundant in testis, thymus, and in tumor derived cell lines, while barely detectable in liver, prostate, and kidney. Ref.1

Developmental stage

Present at the G1/S boundary. Accumulates as cells progress from S to G2 into mitosis. Rapidly degraded during mitosis exit by CDH1-activated anaphase promoting complex/cyclosome (APC/C). Ref.10

Induction

Up-regulated in primary human gastric cancers. Ref.3

Sequence similarities

Belongs to the CKAP2 family.

Sequence caution

The sequence AAG33675.1 differs from that shown. Reason: Frameshift at position 604.

The sequence AAG33675.1 differs from that shown. Reason: Frameshift at position 607.

The sequence AAH10901.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

The sequence AAI05807.1 differs from that shown. Reason: Contaminating sequence. Potential poly-A sequence.

The sequence BAA91788.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Alternative products

This entry describes 3 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 Ref.1 Ref.3 Ref.8 (identifier: Q8WWK9-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 Ref.6 (identifier: Q8WWK9-4)

The sequence of this isoform differs from the canonical sequence as follows:
     53-53: Missing.
     494-495: PI → VR
     496-683: Missing.
Note: No experimental confirmation available.
Isoform 3 Ref.3 (identifier: Q8WWK9-5)

The sequence of this isoform differs from the canonical sequence as follows:
     53-53: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 683683Cytoskeleton-associated protein 2
PRO_0000245774

Amino acid modifications

Modified residue5341Phosphoserine Ref.13
Modified residue5791Phosphothreonine Ref.11
Modified residue5821Phosphothreonine Ref.11
Modified residue5951Phosphoserine Ref.11 Ref.13
Modified residue5961Phosphothreonine Ref.11
Modified residue5971Phosphothreonine Ref.11 Ref.12 Ref.13
Modified residue5991Phosphotyrosine Ref.11
Modified residue6021Phosphoserine Ref.11 Ref.12 Ref.13

Natural variations

Alternative sequence531Missing in isoform 2 and isoform 3.
VSP_047100
Alternative sequence494 – 4952PI → VR in isoform 2.
VSP_047101
Alternative sequence496 – 683188Missing in isoform 2. Ref.3 Ref.6
VSP_047102
Natural variant2361M → K. Ref.8
Corresponds to variant rs35975899 [ dbSNP | Ensembl ].
VAR_054018
Natural variant3231I → V. Ref.1 Ref.4 Ref.7 Ref.8 Ref.9
Corresponds to variant rs7335867 [ dbSNP | Ensembl ].
VAR_069359

Experimental info

Sequence conflict4021P → L in CAB66782. Ref.9
Sequence conflict5311K → Q in BAA91788. Ref.4
Sequence conflict5311K → R in BAB14345. Ref.4
Sequence conflict5591F → L in BAB14345. Ref.4
Sequence conflict5771V → A in BAB14345. Ref.4
Sequence conflict6431K → R in BAA91788. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified March 1, 2002. Version 1.
Checksum: 15287A7D860A4B23

FASTA68376,987
        10         20         30         40         50         60 
MSTPAVPQDL QLPPSQRAQS AFKEQRRQKL KEHLLRRKTL FAYKQENEML SSSRDQRVVT 

        70         80         90        100        110        120 
SEDQVQEGTK VLKLKTKMAD KENMKRPAES KNNTVVGKHC IPLKPSNELT NSTVVIDTHK 

       130        140        150        160        170        180 
PKDSNQTPHL LLTEDDPQSQ HMTLSQAFHL KNNSKKKQMT TEKQKQDANM PKKPVLGSYR 

       190        200        210        220        230        240 
GQIVQSKINS FRKPLQVKDE SSAATKKLSA TIPKATKPQP VNTSSVTVKS NRSSNMTATT 

       250        260        270        280        290        300 
KFVSTTSQNT QLVRPPIRSH HSNTRDTVKQ GISRTSANVT IRKGPHEKEL LQSKTALSSV 

       310        320        330        340        350        360 
KTSSSQGIIR NKTLSRSIAS EVIARPASLS NDKLMEKSEP VDQRRHTAGK AIVDSRSAQP 

       370        380        390        400        410        420 
KETSEERKAR LSEWKAGKGR VLKRPPNSVV TQHEPAGQNE KPVGSFWTTM AEEDEQRLFT 

       430        440        450        460        470        480 
EKVNNTFSEC LNLINEGCPK EDILVTLNDL IKNIPDAKKL VKYWICLALI EPITSPIENI 

       490        500        510        520        530        540 
IAIYEKAILA GAQPIEEMRH TIVDILTMKS QEKANLGENM EKSCASKEEV KEVSIEDTGV 

       550        560        570        580        590        600 
DVDPEKLEME SKLHRNLLFQ DCEKEQDNKT KDPTHDVKTP NTETRTSCLI KYNVSTTPYL 

       610        620        630        640        650        660 
QSVKKKVQFD GTNSAFKELK FLTPVRRSRR LQEKTSKLPD MLKDHYPCVS SLEQLTELGR 

       670        680 
ETDAFVCRPN AALCRVYYEA DTT 

« Hide

Isoform 2 [UniParc].

Checksum: DD773D8CC02C95B6
Show »

FASTA49455,307
Isoform 3 [UniParc].

Checksum: 44F00A4FFEE1FD98
Show »

FASTA68276,900

References

« Hide 'large scale' references
[1]"Identification of a novel cDNA, encoding a cytoskeletal associated protein, differentially expressed in diffuse large B-cell lymphomas."
Maouche-Chretien L., Deleu N., Badoual C., Fraissignes P., Berger R., Gaulard P., Romeo P.H., Leroy-Viard K.
Oncogene 17:1245-1251(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBCELLULAR LOCATION, TISSUE SPECIFICITY, VARIANT VAL-323.
Tissue: T-cell.
[2]"Evolutionarily-conserved gene CKAP2,located in region 13q14.3 of the human genome, is frequently rearranged in various tumors."
Udina I.G., Baranova A.V., Kompaniytsev A.A., Sulimova G.E.
Genetika 37:120-123(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1).
[3]"Up-regulation of cytoskeletal-associated protein 2 in primary human gastric adenocarcinomas."
Bae C.-D., Sung Y.-S., Jeon S.-M., Suh Y., Yang H.-K., Kim Y.-I., Park K.-H., Choi J., Ahn G., Park J.
J. Cancer Res. Clin. Oncol. 129:621-630(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 2 AND 3), SUBCELLULAR LOCATION, INDUCTION.
Tissue: Cervix carcinoma.
[4]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANT VAL-323.
Tissue: Teratocarcinoma.
[5]"The full-ORF clone resource of the German cDNA consortium."
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I.
BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
Tissue: Testis.
[6]"The DNA sequence and analysis of human chromosome 13."
Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. expand/collapse author list , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[7]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANT VAL-323.
Tissue: Bone marrow, Cerebellum and Testis.
[8]"Serological detection of cutaneous T-cell lymphoma-associated antigens."
Eichmueller S., Usener D., Dummer R., Stein A., Thiel D., Schadendorf D.
Proc. Natl. Acad. Sci. U.S.A. 98:629-634(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 38-683 (ISOFORM 1), VARIANTS LYS-236 AND VAL-323.
Tissue: Testis.
[9]"Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs."
Wiemann S., Weil B., Wellenreuther R., Gassenhuber J., Glassl S., Ansorge W., Boecher M., Bloecker H., Bauersachs S., Blum H., Lauber J., Duesterhoeft A., Beyer A., Koehrer K., Strack N., Mewes H.-W., Ottenwaelder B., Obermaier B. expand/collapse author list , Tampe J., Heubner D., Wambutt R., Korn B., Klein M., Poustka A.
Genome Res. 11:422-435(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 135-683 (ISOFORM 1), VARIANT VAL-323.
Tissue: Testis.
[10]"CKAP2 is a spindle-associated protein degraded by APC/C-Cdh1 during mitotic exit."
Seki A., Fang G.
J. Biol. Chem. 282:15103-15113(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION, DEVELOPMENTAL STAGE.
[11]"A quantitative atlas of mitotic phosphorylation."
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-579; THR-582; SER-595; THR-596; THR-597; TYR-599 AND SER-602, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
Tissue: Cervix carcinoma.
[12]"Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-597 AND SER-602, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
Tissue: Leukemic T-cell.
[13]"Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-534; SER-595; THR-597 AND SER-602, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
Tissue: Cervix carcinoma.
[14]"Initial characterization of the human central proteome."
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.
BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y15758 mRNA. Translation: CAC17466.1.
AJ429398 Genomic DNA. Translation: CAD22295.1.
AY062261 mRNA. Translation: AAL47212.1.
AY062262 mRNA. Translation: AAL47213.1.
AK001611 mRNA. Translation: BAA91788.1. Different initiation.
AK022982 mRNA. Translation: BAB14345.1.
EF560732 mRNA. Translation: ABQ59042.1.
AL359513 Genomic DNA. Translation: CAH71660.2.
AL359513 Genomic DNA. Translation: CAH71661.2.
BC010901 mRNA. Translation: AAH10901.1. Different initiation.
BC105806 mRNA. Translation: AAI05807.1. Sequence problems.
BC130296 mRNA. Translation: AAI30297.1.
AF177227 mRNA. Translation: AAG33675.1. Frameshift.
AL136848 mRNA. Translation: CAB66782.2.
CCDSCCDS41893.1. [Q8WWK9-1]
CCDS9435.1. [Q8WWK9-5]
RefSeqNP_001091995.1. NM_001098525.2. [Q8WWK9-1]
NP_001273615.1. NM_001286686.1.
NP_001273616.1. NM_001286687.1. [Q8WWK9-4]
NP_060674.3. NM_018204.4. [Q8WWK9-5]
UniGeneHs.444028.
Hs.594461.

3D structure databases

ProteinModelPortalQ8WWK9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid117755. 3 interactions.
IntActQ8WWK9. 1 interaction.
MINTMINT-4989610.

PTM databases

PhosphoSiteQ8WWK9.

Polymorphism databases

DMDM74751579.

Proteomic databases

MaxQBQ8WWK9.
PaxDbQ8WWK9.
PRIDEQ8WWK9.

Protocols and materials databases

DNASU26586.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENST00000258607; ENSP00000258607; ENSG00000136108. [Q8WWK9-5]
ENST00000378034; ENSP00000367273; ENSG00000136108. [Q8WWK9-4]
ENST00000378037; ENSP00000367276; ENSG00000136108. [Q8WWK9-1]
GeneID26586.
KEGGhsa:26586.
UCSCuc001vgv.2. human. [Q8WWK9-1]

Organism-specific databases

CTD26586.
GeneCardsGC13P053029.
HGNCHGNC:1990. CKAP2.
HPAHPA008410.
HPA027821.
MIM611569. gene.
neXtProtNX_Q8WWK9.
PharmGKBPA26526.
GenAtlasSearch...

Phylogenomic databases

eggNOGNOG25272.
HOVERGENHBG107703.
InParanoidQ8WWK9.
KOK16769.
OMAKQMTTEK.
OrthoDBEOG7X9G6M.
PhylomeDBQ8WWK9.
TreeFamTF333003.

Gene expression databases

ArrayExpressQ8WWK9.
BgeeQ8WWK9.
GenevestigatorQ8WWK9.

Family and domain databases

InterProIPR029197. CKAP2_C.
IPR026165. CKAP2_fam.
[Graphical view]
PANTHERPTHR16076. PTHR16076. 1 hit.
PfamPF15297. CKAP2_C. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GeneWikiCKAP2.
GenomeRNAi26586.
NextBio48956.
PROQ8WWK9.
SOURCESearch...

Entry information

Entry nameCKAP2_HUMAN
AccessionPrimary (citable) accession number: Q8WWK9
Secondary accession number(s): A2BDE0 expand/collapse secondary AC list , A5YM58, Q3KRA5, Q5VXB4, Q8IWV5, Q8IWV6, Q96FH9, Q9H012, Q9H0D0, Q9H988, Q9HC49, Q9NVG4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 11, 2006
Last sequence update: March 1, 2002
Last modified: July 9, 2014
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

SIMILARITY comments

Index of protein domains and families

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human chromosome 13

Human chromosome 13: entries, gene names and cross-references to MIM