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Protein

AN1-type zinc finger protein 2B

Gene

ZFAND2B

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri7 – 52AN1-type 1PROSITE-ProRule annotationAdd BLAST46
Zinc fingeri97 – 145AN1-type 2PROSITE-ProRule annotationAdd BLAST49

GO - Molecular functioni

GO - Biological processi

  • SRP-dependent cotranslational protein targeting to membrane, translocation Source: MGI
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciZFISH:ENSG00000158552-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
AN1-type zinc finger protein 2B
Alternative name(s):
Arsenite-inducible RNA-associated protein-like protein
Short name:
AIRAP-like protein
Gene namesi
Name:ZFAND2B
Synonyms:AIRAPL
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

HGNCiHGNC:25206. ZFAND2B.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000158552.
PharmGKBiPA142670527.

Polymorphism and mutation databases

DMDMi74730823.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002328761 – 257AN1-type zinc finger protein 2BAdd BLAST257

Proteomic databases

EPDiQ8WV99.
MaxQBiQ8WV99.
PaxDbiQ8WV99.
PeptideAtlasiQ8WV99.
PRIDEiQ8WV99.

PTM databases

iPTMnetiQ8WV99.
PhosphoSitePlusiQ8WV99.

Expressioni

Gene expression databases

BgeeiENSG00000158552.
CleanExiHS_ZFAND2B.
ExpressionAtlasiQ8WV99. baseline and differential.
GenevisibleiQ8WV99. HS.

Organism-specific databases

HPAiHPA035159.
HPA035160.

Interactioni

Subunit structurei

Interacts (via VIM motif) with VCP. Upon exposure to arsenite, associates with proteasomes.By similarity1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
DAZAP2Q150388EBI-747823,EBI-724310
TARDBPG3V1623EBI-747823,EBI-10177881
UBQLN1Q9UMX0-23EBI-747823,EBI-10173939

Protein-protein interaction databases

BioGridi126246. 27 interactors.
IntActiQ8WV99. 5 interactors.
MINTiMINT-1448171.
STRINGi9606.ENSP00000289528.

Structurei

Secondary structure

1257
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi116 – 118Combined sources3
Helixi124 – 127Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1X4VNMR-A93-142[»]
ProteinModelPortaliQ8WV99.
SMRiQ8WV99.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8WV99.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini197 – 216UIM 1PROSITE-ProRule annotationAdd BLAST20
Domaini221 – 240UIM 2PROSITE-ProRule annotationAdd BLAST20

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni141 – 151VCP/p97-interacting motif (VIM)1 PublicationAdd BLAST11

Sequence similaritiesi

Contains 2 AN1-type zinc fingers.PROSITE-ProRule annotation
Contains 2 UIM (ubiquitin-interacting motif) domains.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri7 – 52AN1-type 1PROSITE-ProRule annotationAdd BLAST46
Zinc fingeri97 – 145AN1-type 2PROSITE-ProRule annotationAdd BLAST49

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG3183. Eukaryota.
ENOG4111JCH. LUCA.
GeneTreeiENSGT00730000110968.
HOGENOMiHOG000243115.
HOVERGENiHBG061194.
InParanoidiQ8WV99.
OMAiPICPLCH.
OrthoDBiEOG091G0JWA.
PhylomeDBiQ8WV99.
TreeFamiTF314219.

Family and domain databases

Gene3Di4.10.1110.10. 2 hits.
InterProiIPR003903. UIM_dom.
IPR000058. Znf_AN1.
[Graphical view]
PfamiPF01428. zf-AN1. 2 hits.
[Graphical view]
SMARTiSM00726. UIM. 2 hits.
SM00154. ZnF_AN1. 2 hits.
[Graphical view]
PROSITEiPS50330. UIM. 2 hits.
PS51039. ZF_AN1. 2 hits.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q8WV99-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MEFPDLGAHC SEPSCQRLDF LPLKCDACSG IFCADHVAYA QHHCGSAYQK
60 70 80 90 100
DIQVPVCPLC NVPVPVARGE PPDRAVGEHI DRDCRSDPAQ QKRKIFTNKC
110 120 130 140 150
ERAGCRQREM MKLTCERCSR NFCIKHRHPL DHDCSGEGHP TSRAGLAAIS
160 170 180 190 200
RAQAVASTST VPSPSQTMPS CTSPSRATTR SPSWTAPPVI ALQNGLSEDE
210 220 230 240 250
ALQRALEMSL AETKPQVPSC QEEEDLALAQ ALSASEAEYQ RQQAQSRSSK

PSNCSLC
Length:257
Mass (Da):28,023
Last modified:March 1, 2002 - v1
Checksum:iE87D47744157F48C
GO
Isoform 2 (identifier: Q8WV99-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     177-257: Missing.

Show »
Length:176
Mass (Da):19,306
Checksum:iF656E1B2AE47E8EA
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_018001177 – 257Missing in isoform 2. 1 PublicationAdd BLAST81

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK091345 mRNA. Translation: BAC03642.1.
BC018415 mRNA. Translation: AAH18415.1.
CCDSiCCDS2435.1. [Q8WV99-1]
RefSeqiNP_001257927.1. NM_001270998.1. [Q8WV99-1]
NP_001257928.1. NM_001270999.1.
NP_620157.1. NM_138802.2. [Q8WV99-1]
XP_016858857.1. XM_017003368.1. [Q8WV99-1]
UniGeneiHs.534540.

Genome annotation databases

EnsembliENST00000289528; ENSP00000289528; ENSG00000158552. [Q8WV99-1]
ENST00000409206; ENSP00000386824; ENSG00000158552. [Q8WV99-2]
ENST00000409336; ENSP00000386898; ENSG00000158552. [Q8WV99-1]
ENST00000409594; ENSP00000386399; ENSG00000158552. [Q8WV99-2]
ENST00000444522; ENSP00000411334; ENSG00000158552. [Q8WV99-1]
GeneIDi130617.
KEGGihsa:130617.
UCSCiuc002vjz.3. human. [Q8WV99-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK091345 mRNA. Translation: BAC03642.1.
BC018415 mRNA. Translation: AAH18415.1.
CCDSiCCDS2435.1. [Q8WV99-1]
RefSeqiNP_001257927.1. NM_001270998.1. [Q8WV99-1]
NP_001257928.1. NM_001270999.1.
NP_620157.1. NM_138802.2. [Q8WV99-1]
XP_016858857.1. XM_017003368.1. [Q8WV99-1]
UniGeneiHs.534540.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1X4VNMR-A93-142[»]
ProteinModelPortaliQ8WV99.
SMRiQ8WV99.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi126246. 27 interactors.
IntActiQ8WV99. 5 interactors.
MINTiMINT-1448171.
STRINGi9606.ENSP00000289528.

PTM databases

iPTMnetiQ8WV99.
PhosphoSitePlusiQ8WV99.

Polymorphism and mutation databases

DMDMi74730823.

Proteomic databases

EPDiQ8WV99.
MaxQBiQ8WV99.
PaxDbiQ8WV99.
PeptideAtlasiQ8WV99.
PRIDEiQ8WV99.

Protocols and materials databases

DNASUi130617.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000289528; ENSP00000289528; ENSG00000158552. [Q8WV99-1]
ENST00000409206; ENSP00000386824; ENSG00000158552. [Q8WV99-2]
ENST00000409336; ENSP00000386898; ENSG00000158552. [Q8WV99-1]
ENST00000409594; ENSP00000386399; ENSG00000158552. [Q8WV99-2]
ENST00000444522; ENSP00000411334; ENSG00000158552. [Q8WV99-1]
GeneIDi130617.
KEGGihsa:130617.
UCSCiuc002vjz.3. human. [Q8WV99-1]

Organism-specific databases

CTDi130617.
GeneCardsiZFAND2B.
HGNCiHGNC:25206. ZFAND2B.
HPAiHPA035159.
HPA035160.
MIMi613474. gene.
neXtProtiNX_Q8WV99.
OpenTargetsiENSG00000158552.
PharmGKBiPA142670527.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3183. Eukaryota.
ENOG4111JCH. LUCA.
GeneTreeiENSGT00730000110968.
HOGENOMiHOG000243115.
HOVERGENiHBG061194.
InParanoidiQ8WV99.
OMAiPICPLCH.
OrthoDBiEOG091G0JWA.
PhylomeDBiQ8WV99.
TreeFamiTF314219.

Enzyme and pathway databases

BioCyciZFISH:ENSG00000158552-MONOMER.

Miscellaneous databases

ChiTaRSiZFAND2B. human.
EvolutionaryTraceiQ8WV99.
GenomeRNAii130617.
PROiQ8WV99.
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000158552.
CleanExiHS_ZFAND2B.
ExpressionAtlasiQ8WV99. baseline and differential.
GenevisibleiQ8WV99. HS.

Family and domain databases

Gene3Di4.10.1110.10. 2 hits.
InterProiIPR003903. UIM_dom.
IPR000058. Znf_AN1.
[Graphical view]
PfamiPF01428. zf-AN1. 2 hits.
[Graphical view]
SMARTiSM00726. UIM. 2 hits.
SM00154. ZnF_AN1. 2 hits.
[Graphical view]
PROSITEiPS50330. UIM. 2 hits.
PS51039. ZF_AN1. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiZFN2B_HUMAN
AccessioniPrimary (citable) accession number: Q8WV99
Secondary accession number(s): Q8NB98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: March 1, 2002
Last modified: November 30, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 2
    Human chromosome 2: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.