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Protein
Submitted name:

Farnesyl diphosphate synthase

Gene
N/A
Organism
Trypanosoma cruzi
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi52MagnesiumCombined sources1
Metal bindingi56MagnesiumCombined sources1
Metal bindingi124MagnesiumCombined sources1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseUniRule annotation

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDAi2.5.1.10. 6524.

Names & Taxonomyi

Protein namesi
Submitted name:
Farnesyl diphosphate synthaseImported
OrganismiTrypanosoma cruziImported
Taxonomic identifieri5693 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosomaSchizotrypanum

PTM / Processingi

Proteomic databases

PaxDbiQ8WS25.

Interactioni

Protein-protein interaction databases

STRINGi353153.XP_807002.1.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ID0X-ray2.81A1-316[»]
ProteinModelPortaliQ8WS25.
SMRiQ8WS25.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8WS25.

Family & Domainsi

Sequence similaritiesi

Belongs to the FPP/GGPP synthase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0711. Eukaryota.
COG0142. LUCA.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR033749. Polyprenyl_synt_CS.
[Graphical view]
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q8WS25-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GKYFRGMTVV NVAEGFLAVT QHDEATKERI LHDACVGGWM IEFLQAHYLV
60 70 80 90 100
EDDIMDGSVM RRGKPCWYRF PGVTTQCAIN DGIILKSWTQ IMAWHYFADR
110 120 130 140 150
PFLKDLLCLF QKVDYATAVG QMYDVTSMCD SNKLDPEVAQ PMTTDFAEFT
160 170 180 190 200
PAIYKRIVKY KTTFYTYLLP LVMGLFVSEA AASVEMNLVE RVAHLIGEYF
210 220 230 240 250
QVQDDVMDCF TPPEQLGKVG TDIEDAKCSW LAVTFLGKAN AAQVAEFKAN
260 270 280 290 300
YGDKDPAKVA VVKRLYSEAN LQADFAAYEA EVVREVESLI EQLKVKSPTF
310
AESVAVVWEK THKRKK
Length:316
Mass (Da):35,735
Last modified:March 1, 2002 - v1
Checksum:i890D21A9AE9BE454
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF386103 mRNA. Translation: AAL73358.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF386103 mRNA. Translation: AAL73358.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3ID0X-ray2.81A1-316[»]
ProteinModelPortaliQ8WS25.
SMRiQ8WS25.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi353153.XP_807002.1.

Proteomic databases

PaxDbiQ8WS25.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0711. Eukaryota.
COG0142. LUCA.

Enzyme and pathway databases

BRENDAi2.5.1.10. 6524.

Miscellaneous databases

EvolutionaryTraceiQ8WS25.

Family and domain databases

Gene3Di1.10.600.10. 1 hit.
InterProiIPR008949. Isoprenoid_synthase_dom.
IPR000092. Polyprenyl_synt.
IPR033749. Polyprenyl_synt_CS.
[Graphical view]
PfamiPF00348. polyprenyl_synt. 1 hit.
[Graphical view]
SUPFAMiSSF48576. SSF48576. 1 hit.
PROSITEiPS00723. POLYPRENYL_SYNTHASE_1. 1 hit.
PS00444. POLYPRENYL_SYNTHASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ8WS25_TRYCR
AccessioniPrimary (citable) accession number: Q8WS25
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 30, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.